Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU614654 |
| length | 879 |
| RNA type | TUCP |
| GC content | 0.45 |
| exon number | 4 |
| gene id | saa |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 72665460 ~ 72666872 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006953 | acute-phase response | biological_process |
| GO:0009617 | response to bacterium | biological_process |
| GO:0034364 | high-density lipoprotein particle | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU614646 | lncRNA | upstream | 66062 | 72599155 ~ 72599398 (+) | True | G542781 |
| TU614601 | lncRNA | upstream | 68798 | 72596373 ~ 72596662 (+) | True | G542742 |
| TU614600 | lncRNA | upstream | 69479 | 72595744 ~ 72595981 (+) | True | G542741 |
| TU614033 | lncRNA | upstream | 210109 | 72448348 ~ 72455351 (+) | False | G542250 |
| TU614032 | lncRNA | upstream | 210109 | 72450591 ~ 72455351 (+) | True | G542250 |
| TU614724 | lncRNA | downstream | 41378 | 72708250 ~ 72761891 (+) | True | LOC110526531 |
| TU614735 | lncRNA | downstream | 49430 | 72716302 ~ 72721047 (+) | False | G542860 |
| TU614736 | lncRNA | downstream | 51973 | 72718845 ~ 72721047 (+) | True | G542860 |
| TU614767 | lncRNA | downstream | 100039 | 72766911 ~ 72767323 (+) | True | G542891 |
| TU614770 | lncRNA | downstream | 112163 | 72779035 ~ 72780214 (+) | True | G542894 |
| NM_001160521.1 | mRNA | upstream | 6557 | 72654435 ~ 72658903 (+) | True | frih |
| XM_021607572.2 | mRNA | upstream | 21772 | 72641751 ~ 72643688 (+) | True | LOC110526528 |
| XM_021607571.2 | mRNA | upstream | 27110 | 72632781 ~ 72638350 (+) | True | LOC110526527 |
| XM_021607563.2 | mRNA | upstream | 34079 | 72613695 ~ 72631381 (+) | False | LOC110526524 |
| XM_021607565.2 | mRNA | upstream | 34079 | 72616421 ~ 72631381 (+) | False | LOC110526524 |
| XM_036980910.1 | mRNA | downstream | 993 | 72667865 ~ 72672678 (+) | False | LOC110518525 |
| XM_036980909.1 | mRNA | downstream | 2115 | 72668987 ~ 72672678 (+) | False | LOC110518525 |
| XM_036980908.1 | mRNA | downstream | 2116 | 72668988 ~ 72672677 (+) | False | LOC110518525 |
| XM_036980907.1 | mRNA | downstream | 2118 | 72668990 ~ 72672674 (+) | True | LOC110518525 |
| XM_036980911.1 | mRNA | downstream | 22471 | 72689343 ~ 72690657 (+) | True | LOC118964931 |
| TU613870 | other | upstream | 513066 | 72151020 ~ 72152394 (+) | True | G542100 |
| TU613820 | other | upstream | 562986 | 72101380 ~ 72102474 (+) | True | G542053 |
| TU613619 | other | upstream | 860998 | 71800040 ~ 71804462 (+) | True | G541903 |
| TU611814 | other | upstream | 2043986 | 70615525 ~ 70621474 (+) | False | cmc2 |
| TU611817 | other | upstream | 2043986 | 70615525 ~ 70621474 (+) | False | cmc2 |
| TU614766 | other | downstream | 98809 | 72765681 ~ 72766851 (+) | True | G542890 |
| TU614905 | other | downstream | 371749 | 73038621 ~ 73145347 (+) | True | LOC110526543 |
| TU615384 | other | downstream | 705933 | 73372805 ~ 73387687 (+) | False | LOC100136290 |
| TU616612 | other | downstream | 1620906 | 74287778 ~ 74288138 (+) | True | G544565 |
| TU617662 | other | downstream | 2570928 | 75237800 ~ 75238164 (+) | True | G545485 |
