Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU616003 |
| length | 1174 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 2 |
| gene id | tub |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 73793635 ~ 73891981 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU615987 | lncRNA | upstream | 86828 | 73771170 ~ 73771497 (+) | True | G543997 |
| TU615963 | lncRNA | upstream | 132649 | 73725207 ~ 73725676 (+) | True | G543978 |
| TU615872 | lncRNA | upstream | 221721 | 73634966 ~ 73636604 (+) | True | G543890 |
| TU615803 | lncRNA | upstream | 295732 | 73562367 ~ 73562593 (+) | True | G543822 |
| TU615801 | lncRNA | upstream | 310121 | 73547876 ~ 73548204 (+) | True | G543820 |
| TU616308 | lncRNA | downstream | 43746 | 73935727 ~ 73935939 (+) | True | G544292 |
| TU616440 | lncRNA | downstream | 143499 | 74035480 ~ 74035734 (+) | True | G544407 |
| TU616456 | lncRNA | downstream | 168884 | 74060865 ~ 74061122 (+) | True | G544423 |
| TU616457 | lncRNA | downstream | 170712 | 74062693 ~ 74063015 (+) | True | G544424 |
| TU616460 | lncRNA | downstream | 179680 | 74071661 ~ 74071882 (+) | True | G544427 |
| XM_021607601.2 | mRNA | upstream | 69082 | 73744899 ~ 73789243 (+) | False | rras2 |
| XM_036980937.1 | mRNA | upstream | 69082 | 73779510 ~ 73789243 (+) | True | rras2 |
| XM_036980936.1 | mRNA | upstream | 116708 | 73733797 ~ 73741617 (+) | False | copb1 |
| XM_021607600.2 | mRNA | upstream | 116708 | 73733805 ~ 73741617 (+) | False | copb1 |
| XM_021607599.2 | mRNA | upstream | 116708 | 73733821 ~ 73741617 (+) | True | copb1 |
| XR_005052431.1 | mRNA | downstream | 417059 | 74309040 ~ 74309094 (+) | True | LOC118965098 |
| XR_005052432.1 | mRNA | downstream | 419360 | 74311341 ~ 74311395 (+) | True | LOC118965099 |
| XR_005052433.1 | mRNA | downstream | 421655 | 74313636 ~ 74313690 (+) | True | LOC118965100 |
| XR_005052434.1 | mRNA | downstream | 423920 | 74315901 ~ 74315955 (+) | True | LOC118965101 |
| XR_005052435.1 | mRNA | downstream | 426220 | 74318201 ~ 74318255 (+) | True | LOC118965102 |
| TU615384 | other | upstream | 470638 | 73372805 ~ 73387687 (+) | False | LOC100136290 |
| TU614905 | other | upstream | 712978 | 73038621 ~ 73145347 (+) | True | LOC110526543 |
| TU614766 | other | upstream | 1091474 | 72765681 ~ 72766851 (+) | True | G542890 |
| TU614654 | other | upstream | 1191453 | 72665460 ~ 72666872 (+) | True | saa |
| TU613870 | other | upstream | 1705931 | 72151020 ~ 72152394 (+) | True | G542100 |
| TU616612 | other | downstream | 395797 | 74287778 ~ 74288138 (+) | True | G544565 |
| TU617662 | other | downstream | 1345819 | 75237800 ~ 75238164 (+) | True | G545485 |
| TU617795 | other | downstream | 1529880 | 75421861 ~ 75422752 (+) | True | G545601 |
| TU618729 | other | downstream | 2036247 | 75928228 ~ 75970674 (+) | True | G546464 |
| TU619876 | other | downstream | 2995451 | 76887432 ~ 77036313 (+) | False | LOC110526968 |
