RNA id: TU526299


Basic Information

Item Value
RNA id TU526299
length 884
lncRNA type inter_gene
GC content 0.37
exon number 3
gene id G463671
representative False

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 20723 ~ 41646 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tactgtctctatctctcttttatattatgacagaccagctagatctactgactctattatattatgacagaccagctagatctactgtctctattatattatgacagaccagctagatctactgtctctattatattatgacataccagttagatctactgtctctattatattatgacagaccagctagaactactgtctctattatattatgacataccagctagatctactgtctctattatattatgacagaccagctagatctactgtctctattatattttgacagaccagctagatctactgtctttattatattatgacaaaccagctagatctactgtctctattatattatgacagaccagctagatctactgtctctattatattatgacagaccagctagatctaccgtctcaatgtctccattatattatgacagaccagctagatcttatttctcttttataatatgaccgaccagcctgaactactgtctctattatattatgacataccagctagatctactgtctctattatattatgacagaccagctagatctactgtctctattatattatgacagaccatcaagatcaattaaaatcaaatcaaatgtatttatatagccctttgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggatatgtggggtggccagtcctcttctggctgtgctgggtggagattataacagaacatggccaagatgttcaaatgttcataaatgaccagcat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU526350 lncRNA downstream 8577 50119 ~ 52580 (+) True LOC118964799
TU526356 lncRNA downstream 32168 73710 ~ 77877 (+) True LOC118964800
TU526380 lncRNA downstream 47386 88928 ~ 90024 (+) True G463724
TU526388 lncRNA downstream 61429 102971 ~ 103720 (+) True G463732
TU526449 lncRNA downstream 167824 209366 ~ 210014 (+) True G463786
XM_036979168.1 mRNA downstream 2354 43896 ~ 48827 (+) False LOC118964799
XM_036979167.1 mRNA downstream 2354 43896 ~ 49001 (+) False LOC118964799
XM_036979169.1 mRNA downstream 14531 56073 ~ 75864 (+) False LOC118964800
XR_005051976.1 mRNA downstream 14531 56073 ~ 75864 (+) False LOC118964800
XM_036979178.1 mRNA downstream 401174 442716 ~ 549899 (+) False LOC110525138
TU526342 other downstream 2383 43925 ~ 50875 (+) False LOC118964799
TU526343 other downstream 2383 43925 ~ 50875 (+) False LOC118964799
TU526346 other downstream 2383 43925 ~ 52490 (+) False LOC118964799
TU526347 other downstream 2383 43925 ~ 50875 (+) False LOC118964799
TU526348 other downstream 2383 43925 ~ 52490 (+) False LOC118964799

Expression Profile