RNA id: TU528032



Basic Information


Item Value
RNA id TU528032
length 213
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G464973
representative True

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 1632366 ~ 1632629 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


acacttaatgtattgtagagtagaggtctgagggaacacacttaatgtgttgtagatatgtggtagtagagtagtggtctgagggaacacacttaatgtattgtagatatgtggtagtagagtagagacacttaatgtgttgtagatatgtggtagtagagtagtggtctgagggaacacacttaatgtgttgtagatatgtggtagtagagt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU528054 lncRNA upstream 10325 1621412 ~ 1622041 (+) True G464989
TU528041 lncRNA upstream 30353 1600499 ~ 1602013 (+) True G464979
TU528017 lncRNA upstream 47450 1569217 ~ 1584916 (+) False G464969
TU528012 lncRNA upstream 48426 1557735 ~ 1583940 (+) False G464969
TU527985 lncRNA upstream 48426 1573268 ~ 1583940 (+) False G464969
TU528064 lncRNA downstream 901 1633530 ~ 1633915 (+) True G464999
TU528095 lncRNA downstream 48998 1681627 ~ 1685862 (+) False G465025
TU528097 lncRNA downstream 49852 1682481 ~ 1686137 (+) True G465026
TU528099 lncRNA downstream 51214 1683843 ~ 1684926 (+) True G465027
TU528096 lncRNA downstream 52824 1685453 ~ 1685862 (+) True G465025
XM_036979187.1 mRNA upstream 513777 775664 ~ 1118589 (+) False slc4a4a
XM_036979195.1 mRNA downstream 369459 2002088 ~ 2105141 (+) False LOC110525062
XM_036979196.1 mRNA downstream 369459 2002088 ~ 2105141 (+) True LOC110525062
XM_036979198.1 mRNA downstream 516611 2149240 ~ 2199894 (+) False LOC110525063
XM_036979197.1 mRNA downstream 517203 2149832 ~ 2199894 (+) False LOC110525063
XM_036979199.1 mRNA downstream 529920 2162549 ~ 2199894 (+) True LOC110525063
TU527663 other upstream 403267 1228705 ~ 1229099 (+) True G464705
TU526870 other upstream 1173360 456833 ~ 459006 (+) True LOC110525138
TU526492 other upstream 1364215 265409 ~ 268151 (+) False G463813
TU526495 other upstream 1364215 265409 ~ 268151 (+) True G463813
TU526354 other upstream 1581491 43925 ~ 50875 (+) False LOC118964799
TU528322 other downstream 429699 2062328 ~ 2064067 (+) True G465203
TU528467 other downstream 767132 2399761 ~ 2409258 (+) True zfr
TU528499 other downstream 772490 2405119 ~ 2406090 (+) True G465355
TU528673 other downstream 1172754 2805383 ~ 2834110 (+) True LOC110525071
TU528784 other downstream 1346213 2978842 ~ 2982425 (+) True G465578

Expression Profile