Item | Value |
---|---|
RNA id | TU531553 |
length | 472 |
lncRNA type | intronic |
GC content | 0.40 |
exon number | 2 |
gene id | G467828 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 4923424 ~ 4924952 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU531548 | lncRNA | upstream | 14535 | 4908560 ~ 4908889 (+) | True | G467823 |
TU531544 | lncRNA | upstream | 30515 | 4889387 ~ 4892909 (+) | True | G467819 |
TU531439 | lncRNA | upstream | 208023 | 4713374 ~ 4715401 (+) | True | G467733 |
TU531414 | lncRNA | upstream | 225941 | 4697245 ~ 4697483 (+) | True | G467713 |
TU531405 | lncRNA | upstream | 232773 | 4690443 ~ 4690651 (+) | True | G467705 |
TU531524 | lncRNA | downstream | 9680 | 4934632 ~ 4935126 (+) | False | bmp2k |
TU531528 | lncRNA | downstream | 10264 | 4935216 ~ 4935448 (+) | True | bmp2k |
TU531559 | lncRNA | downstream | 17424 | 4942376 ~ 4942599 (+) | True | G467834 |
TU531564 | lncRNA | downstream | 26631 | 4951583 ~ 4951844 (+) | True | G467839 |
TU531565 | lncRNA | downstream | 27408 | 4952360 ~ 4952649 (+) | True | G467840 |
XR_005051987.1 | mRNA | upstream | 5333 | 4914866 ~ 4918091 (+) | True | LOC118964809 |
XM_021605124.2 | mRNA | upstream | 131001 | 4790838 ~ 4792423 (+) | True | LOC110525174 |
XM_021605116.2 | mRNA | upstream | 272553 | 4643954 ~ 4650871 (+) | False | LOC110525169 |
XM_021605117.2 | mRNA | upstream | 272553 | 4644857 ~ 4650871 (+) | True | LOC110525169 |
XR_005051986.1 | mRNA | upstream | 329234 | 4592804 ~ 4594190 (+) | True | LOC118964808 |
XM_021605130.2 | mRNA | downstream | 654822 | 5579774 ~ 5585518 (+) | False | prdm8b |
XM_036979247.1 | mRNA | downstream | 654823 | 5579775 ~ 5585518 (+) | True | prdm8b |
XM_036981819.1 | mRNA | downstream | 698148 | 5623100 ~ 5624315 (+) | True | LOC118965066 |
XM_036979248.1 | mRNA | downstream | 732316 | 5657268 ~ 5658483 (+) | True | LOC118964810 |
LOC110525066 | mRNA | downstream | 1073874 | 5998826 ~ 6036553 (+) | True | LOC110525066 |
TU530344 | other | upstream | 1150084 | 3772864 ~ 3773340 (+) | True | G466813 |
TU528784 | other | upstream | 1940999 | 2978842 ~ 2982425 (+) | True | G465578 |
TU528673 | other | upstream | 2089314 | 2805383 ~ 2834110 (+) | True | LOC110525071 |
TU528467 | other | upstream | 2514166 | 2399761 ~ 2409258 (+) | True | zfr |
TU532741 | other | downstream | 1183427 | 6108379 ~ 6156681 (+) | False | G468732 |
TU532738 | other | downstream | 1230495 | 6155447 ~ 6156681 (+) | False | G468732 |
TU532739 | other | downstream | 1230495 | 6155447 ~ 6156681 (+) | True | G468732 |
TU532623 | other | downstream | 1269820 | 6194772 ~ 6199155 (+) | True | G468643 |
TU532773 | other | downstream | 1285247 | 6210199 ~ 6244501 (+) | True | G468755 |