Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU531848 |
| length | 343 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 2 |
| gene id | G468066 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 5149071 ~ 5149538 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU531807 | lncRNA | upstream | 40639 | 5108184 ~ 5108432 (+) | True | G468033 |
| TU531797 | lncRNA | upstream | 50487 | 5097347 ~ 5098584 (+) | True | G468030 |
| TU531790 | lncRNA | upstream | 57149 | 5091578 ~ 5091922 (+) | True | G468025 |
| TU531765 | lncRNA | upstream | 94664 | 5054155 ~ 5054407 (+) | True | G468000 |
| TU531758 | lncRNA | upstream | 106282 | 5042566 ~ 5042789 (+) | True | G467993 |
| TU531858 | lncRNA | downstream | 4201 | 5153739 ~ 5153949 (+) | True | G468076 |
| TU531859 | lncRNA | downstream | 4966 | 5154504 ~ 5154835 (+) | True | G468077 |
| TU531880 | lncRNA | downstream | 30074 | 5179612 ~ 5181167 (+) | True | G468096 |
| TU531886 | lncRNA | downstream | 39759 | 5189297 ~ 5189501 (+) | True | G468102 |
| TU531920 | lncRNA | downstream | 60879 | 5210417 ~ 5210639 (+) | True | G468131 |
| XM_036979244.1 | mRNA | upstream | 213622 | 4842875 ~ 4935449 (+) | False | bmp2k |
| XM_036979245.1 | mRNA | upstream | 213622 | 4842876 ~ 4935449 (+) | False | bmp2k |
| XR_005051987.1 | mRNA | upstream | 230980 | 4914866 ~ 4918091 (+) | True | LOC118964809 |
| XM_021605124.2 | mRNA | upstream | 356648 | 4790838 ~ 4792423 (+) | True | LOC110525174 |
| XM_021605116.2 | mRNA | upstream | 498200 | 4643954 ~ 4650871 (+) | False | LOC110525169 |
| XM_021605130.2 | mRNA | downstream | 430236 | 5579774 ~ 5585518 (+) | False | prdm8b |
| XM_036979247.1 | mRNA | downstream | 430237 | 5579775 ~ 5585518 (+) | True | prdm8b |
| XM_036981819.1 | mRNA | downstream | 473562 | 5623100 ~ 5624315 (+) | True | LOC118965066 |
| XM_036979248.1 | mRNA | downstream | 507730 | 5657268 ~ 5658483 (+) | True | LOC118964810 |
| LOC110525066 | mRNA | downstream | 849288 | 5998826 ~ 6036553 (+) | True | LOC110525066 |
| TU530344 | other | upstream | 1375731 | 3772864 ~ 3773340 (+) | True | G466813 |
| TU528784 | other | upstream | 2166646 | 2978842 ~ 2982425 (+) | True | G465578 |
| TU528673 | other | upstream | 2314961 | 2805383 ~ 2834110 (+) | True | LOC110525071 |
| TU528467 | other | upstream | 2739813 | 2399761 ~ 2409258 (+) | True | zfr |
| TU532741 | other | downstream | 958841 | 6108379 ~ 6156681 (+) | False | G468732 |
| TU532738 | other | downstream | 1005909 | 6155447 ~ 6156681 (+) | False | G468732 |
| TU532739 | other | downstream | 1005909 | 6155447 ~ 6156681 (+) | True | G468732 |
| TU532623 | other | downstream | 1045234 | 6194772 ~ 6199155 (+) | True | G468643 |
| TU532773 | other | downstream | 1060661 | 6210199 ~ 6244501 (+) | True | G468755 |
