Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU532227 |
| length | 641 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 3 |
| gene id | G468371 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 5463182 ~ 5509904 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU532223 | lncRNA | upstream | 3465 | 5459514 ~ 5459717 (+) | True | G468369 |
| TU532131 | lncRNA | upstream | 28533 | 5434003 ~ 5434649 (+) | True | G468297 |
| TU532130 | lncRNA | upstream | 29702 | 5433096 ~ 5433480 (+) | True | G468296 |
| TU532123 | lncRNA | upstream | 49069 | 5412627 ~ 5414113 (+) | True | G468290 |
| TU532065 | lncRNA | upstream | 143479 | 5318348 ~ 5319703 (+) | True | G468242 |
| TU532258 | lncRNA | downstream | 12923 | 5522827 ~ 5523447 (+) | True | G468381 |
| TU532265 | lncRNA | downstream | 21726 | 5531630 ~ 5531863 (+) | True | G468388 |
| TU532281 | lncRNA | downstream | 37831 | 5547735 ~ 5593087 (+) | True | G468404 |
| TU532334 | lncRNA | downstream | 187661 | 5697565 ~ 5698207 (+) | True | G468445 |
| TU532374 | lncRNA | downstream | 255275 | 5765179 ~ 5765640 (+) | True | G468483 |
| XM_036979244.1 | mRNA | upstream | 527733 | 4842875 ~ 4935449 (+) | False | bmp2k |
| XM_036979245.1 | mRNA | upstream | 527733 | 4842876 ~ 4935449 (+) | False | bmp2k |
| XR_005051987.1 | mRNA | upstream | 545091 | 4914866 ~ 4918091 (+) | True | LOC118964809 |
| XM_021605124.2 | mRNA | upstream | 670759 | 4790838 ~ 4792423 (+) | True | LOC110525174 |
| XM_021605116.2 | mRNA | upstream | 812311 | 4643954 ~ 4650871 (+) | False | LOC110525169 |
| XM_021605130.2 | mRNA | downstream | 69870 | 5579774 ~ 5585518 (+) | False | prdm8b |
| XM_036979247.1 | mRNA | downstream | 69871 | 5579775 ~ 5585518 (+) | True | prdm8b |
| XM_036981819.1 | mRNA | downstream | 113196 | 5623100 ~ 5624315 (+) | True | LOC118965066 |
| XM_036979248.1 | mRNA | downstream | 147364 | 5657268 ~ 5658483 (+) | True | LOC118964810 |
| LOC110525066 | mRNA | downstream | 488922 | 5998826 ~ 6036553 (+) | True | LOC110525066 |
| TU530344 | other | upstream | 1689842 | 3772864 ~ 3773340 (+) | True | G466813 |
| TU528784 | other | upstream | 2480757 | 2978842 ~ 2982425 (+) | True | G465578 |
| TU528673 | other | upstream | 2629072 | 2805383 ~ 2834110 (+) | True | LOC110525071 |
| TU528467 | other | upstream | 3053924 | 2399761 ~ 2409258 (+) | True | zfr |
| TU532741 | other | downstream | 598475 | 6108379 ~ 6156681 (+) | False | G468732 |
| TU532738 | other | downstream | 645543 | 6155447 ~ 6156681 (+) | False | G468732 |
| TU532739 | other | downstream | 645543 | 6155447 ~ 6156681 (+) | True | G468732 |
| TU532623 | other | downstream | 684868 | 6194772 ~ 6199155 (+) | True | G468643 |
| TU532773 | other | downstream | 700295 | 6210199 ~ 6244501 (+) | True | G468755 |
