RNA id: TU532767


Basic Information

Item Value
RNA id TU532767
length 292
lncRNA type inter_gene
GC content 0.58
exon number 3
gene id G468753
representative False

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6190157 ~ 6192605 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ctagtggttagagtgtagaggaggcagggtagcctagtggttagagtgtagaggtggcagggtagccaagtggttagagtgtagaggcggcagggtagcctagtggttagagtgtaggggtggcagggtagcctagtggttagagtgtagaggcggcagggtagccgagtggttagagtgtaggggcggcaggtgtagagggggcagggtagcctagtggttagagtgtagaggcggcagggtagcctagtggttagagtgtagaggcggcagggtagcctagtggttagag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU532585 lncRNA upstream 16754 6171428 ~ 6173403 (+) False LOC118964813
TU532596 lncRNA upstream 16754 6171428 ~ 6173403 (+) False LOC118964813
TU532603 lncRNA upstream 16754 6171428 ~ 6173403 (+) False LOC118964813
TU532606 lncRNA upstream 16754 6171428 ~ 6173403 (+) True LOC118964813
TU532745 lncRNA upstream 74860 6114481 ~ 6115297 (+) True G468735
TU532615 lncRNA downstream 7554 6200159 ~ 6201970 (+) True G468635
TU532640 lncRNA downstream 9473 6202078 ~ 6242781 (+) True G468660
TU532761 lncRNA downstream 10038 6202643 ~ 6205812 (+) True G468747
TU532770 lncRNA downstream 12477 6205082 ~ 6209705 (+) False G468754
TU532771 lncRNA downstream 14375 6206980 ~ 6209705 (+) True G468754
XM_036979262.1 mRNA upstream 16746 6166943 ~ 6173411 (+) False LOC118964813
XM_036979252.1 mRNA upstream 42158 6112481 ~ 6147999 (+) False LOC110510489
XM_036979286.1 mRNA downstream 31649 6224254 ~ 6231400 (+) False LOC110510500
XM_036979285.1 mRNA downstream 230536 6423141 ~ 6428139 (+) True LOC110518225
XM_036979284.1 mRNA downstream 289407 6482012 ~ 6488606 (+) True LOC118964815
XM_021605151.2 mRNA downstream 416316 6608921 ~ 6609844 (+) True LOC110525188
XM_021605152.2 mRNA downstream 490302 6682907 ~ 6692547 (+) True ydjc
TU532741 other upstream 33476 6108379 ~ 6156681 (+) False G468732
TU532738 other upstream 33476 6155447 ~ 6156681 (+) False G468732
TU532739 other upstream 33476 6155447 ~ 6156681 (+) True G468732
TU530344 other upstream 2416817 3772864 ~ 3773340 (+) True G466813
TU528784 other upstream 3207732 2978842 ~ 2982425 (+) True G465578
TU532623 other downstream 2167 6194772 ~ 6199155 (+) True G468643
TU532773 other downstream 17594 6210199 ~ 6244501 (+) True G468755
TU532794 other downstream 61871 6254476 ~ 6343615 (+) False G468768
TU532821 other downstream 185034 6377639 ~ 6379269 (+) True G468791
TU532790 other downstream 230809 6423414 ~ 6488418 (+) False G468765

Expression Profile