RNA id: TU532771



Basic Information


Item Value
RNA id TU532771
length 207
lncRNA type intronic
GC content 0.37
exon number 2
gene id G468754
representative True

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 6205082 ~ 6209705 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctatagcagatatataatgggaggactatgtgaaatgttgacctctatgacagatatatagtgggaggactatgtgaaatattgaacTCTATgacagatatatagtgggaggactatgtgaaatgttgagctctatagcagatatatagtgggaggactatgtgaaatattgacctctatagcagatatatagtgggaggactatgc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU532760 lncRNA upstream 1168 6180233 ~ 6205812 (+) False G468747
TU532761 lncRNA upstream 1168 6202643 ~ 6205812 (+) True G468747
TU532615 lncRNA upstream 5010 6200159 ~ 6201970 (+) True G468635
TU532767 lncRNA upstream 14375 6190157 ~ 6192605 (+) False G468753
TU532768 lncRNA upstream 14375 6190498 ~ 6192605 (+) True G468753
TU532785 lncRNA downstream 18237 6227942 ~ 6228783 (+) True G468764
TU532791 lncRNA downstream 19594 6229299 ~ 6231849 (+) True LOC110510500
TU532633 lncRNA downstream 41473 6251178 ~ 6363339 (+) True G468653
TU532799 lncRNA downstream 48263 6257968 ~ 6261479 (+) True G468770
TU532797 lncRNA downstream 70090 6279795 ~ 6309385 (+) False G468768
XM_036979262.1 mRNA upstream 33569 6166943 ~ 6173411 (+) False LOC118964813
XM_036979252.1 mRNA upstream 58981 6112481 ~ 6147999 (+) False LOC110510489
XM_036979286.1 mRNA downstream 14549 6224254 ~ 6231400 (+) False LOC110510500
XM_036979285.1 mRNA downstream 213436 6423141 ~ 6428139 (+) True LOC110518225
XM_036979284.1 mRNA downstream 272307 6482012 ~ 6488606 (+) True LOC118964815
XM_021605151.2 mRNA downstream 399216 6608921 ~ 6609844 (+) True LOC110525188
XM_021605152.2 mRNA downstream 473202 6682907 ~ 6692547 (+) True ydjc
TU532623 other upstream 7825 6194772 ~ 6199155 (+) True G468643
TU532741 other upstream 50299 6108379 ~ 6156681 (+) False G468732
TU532738 other upstream 50299 6155447 ~ 6156681 (+) False G468732
TU532739 other upstream 50299 6155447 ~ 6156681 (+) True G468732
TU530344 other upstream 2433640 3772864 ~ 3773340 (+) True G466813
TU532773 other downstream 494 6210199 ~ 6244501 (+) True G468755
TU532794 other downstream 44771 6254476 ~ 6343615 (+) False G468768
TU532821 other downstream 167934 6377639 ~ 6379269 (+) True G468791
TU532790 other downstream 213709 6423414 ~ 6488418 (+) False G468765
TU532896 other downstream 341272 6550977 ~ 6553095 (+) False G468841

Expression Profile