Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU539854 |
| length | 545 |
| lncRNA type | read_through |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G474852 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 12504162 ~ 12577127 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU539848 | lncRNA | upstream | 6158 | 12497786 ~ 12498004 (+) | True | G474847 |
| TU539841 | lncRNA | upstream | 18460 | 12485356 ~ 12485702 (+) | True | G474840 |
| TU539438 | lncRNA | upstream | 65982 | 12437953 ~ 12438180 (+) | True | G474481 |
| TU539435 | lncRNA | upstream | 70286 | 12433475 ~ 12433876 (+) | True | G474478 |
| TU539434 | lncRNA | upstream | 70995 | 12432967 ~ 12433167 (+) | True | G474477 |
| TU539956 | lncRNA | downstream | 129238 | 12706365 ~ 12776504 (+) | True | G474945 |
| TU539959 | lncRNA | downstream | 136649 | 12713776 ~ 12715008 (+) | True | G474948 |
| TU539966 | lncRNA | downstream | 144087 | 12721214 ~ 12722439 (+) | True | G474953 |
| TU540013 | lncRNA | downstream | 212449 | 12789576 ~ 12795442 (+) | True | G474995 |
| TU540029 | lncRNA | downstream | 241969 | 12819096 ~ 12819405 (+) | True | G475009 |
| XM_036979165.1 | mRNA | upstream | 204779 | 12298373 ~ 12299383 (+) | True | LOC118964798 |
| XM_036979420.1 | mRNA | upstream | 221537 | 12272561 ~ 12282625 (+) | False | LOC110525277 |
| XR_005052022.1 | mRNA | upstream | 221537 | 12272561 ~ 12282625 (+) | False | LOC110525277 |
| XM_021605268.2 | mRNA | upstream | 256865 | 12244381 ~ 12247297 (+) | True | LOC110525274 |
| XM_021605263.2 | mRNA | upstream | 494143 | 11988363 ~ 12010019 (+) | False | LOC110525268 |
| XM_036979166.1 | mRNA | downstream | 6844 | 12583971 ~ 12586483 (+) | True | LOC110525282 |
| XM_021605291.2 | mRNA | downstream | 138766 | 12715893 ~ 12717368 (+) | False | hspb11 |
| XM_021605292.2 | mRNA | downstream | 138766 | 12715893 ~ 12717368 (+) | True | hspb11 |
| XM_021605299.2 | mRNA | downstream | 305477 | 12882604 ~ 12888336 (+) | True | LOC110525291 |
| XM_021605297.2 | mRNA | downstream | 311358 | 12888485 ~ 12895396 (+) | False | arsk |
| TU539852 | other | upstream | 43 | 12503760 ~ 12504119 (+) | True | G474851 |
| TU539228 | other | upstream | 313590 | 12188288 ~ 12190572 (+) | True | G474321 |
| TU537828 | other | upstream | 1224897 | 11278338 ~ 11279265 (+) | True | G473070 |
| TU537053 | other | upstream | 2223039 | 10280306 ~ 10281123 (+) | True | G472364 |
| TU535218 | other | upstream | 3230209 | 9268378 ~ 9273953 (+) | False | LOC110525088 |
| TU539960 | other | downstream | 135179 | 12712306 ~ 12713298 (+) | True | G474949 |
| TU540778 | other | downstream | 736552 | 13313679 ~ 13313969 (+) | True | G475692 |
| TU541379 | other | downstream | 1407713 | 13984840 ~ 13985259 (+) | True | G476234 |
| TU541393 | other | downstream | 1419957 | 13997084 ~ 14015564 (+) | True | G476248 |
| TU544659 | other | downstream | 3782289 | 16359416 ~ 16359751 (+) | True | G479239 |
