Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU543684 |
| length | 634 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G478375 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 15611533 ~ 15612456 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU543678 | lncRNA | upstream | 9300 | 15602013 ~ 15602233 (+) | True | G478370 |
| TU543449 | lncRNA | upstream | 172218 | 15439027 ~ 15439315 (+) | True | G478144 |
| TU542834 | lncRNA | upstream | 538031 | 15001114 ~ 15073502 (+) | True | G477552 |
| TU542830 | lncRNA | upstream | 612650 | 14998494 ~ 14998883 (+) | True | G477549 |
| TU542683 | lncRNA | upstream | 705096 | 14906134 ~ 14906437 (+) | True | G477409 |
| TU543735 | lncRNA | downstream | 59712 | 15672168 ~ 15672493 (+) | True | G478424 |
| TU543741 | lncRNA | downstream | 64191 | 15676647 ~ 15676906 (+) | True | G478430 |
| TU543784 | lncRNA | downstream | 115052 | 15727508 ~ 15730287 (+) | True | LOC110525312 |
| TU543831 | lncRNA | downstream | 270256 | 15882712 ~ 15883194 (+) | False | G478514 |
| TU543832 | lncRNA | downstream | 270256 | 15882712 ~ 15883517 (+) | False | G478514 |
| XM_021605320.2 | mRNA | upstream | 615856 | 14969490 ~ 14995677 (+) | True | LOC110525309 |
| LOC110525103 | mRNA | upstream | 721358 | 14836143 ~ 14890175 (+) | True | LOC110525103 |
| XM_021605049.2 | mRNA | upstream | 892800 | 14706877 ~ 14718733 (+) | False | LOC110525102 |
| XM_036979438.1 | mRNA | upstream | 892800 | 14716318 ~ 14718733 (+) | True | LOC110525102 |
| XM_021605318.2 | mRNA | upstream | 904678 | 14692426 ~ 14706855 (+) | True | LOC110525306 |
| XM_021605326.1 | mRNA | downstream | 115041 | 15727497 ~ 15730279 (+) | False | LOC110525312 |
| XR_002473690.2 | mRNA | downstream | 204994 | 15817450 ~ 15821090 (+) | False | LOC110525007 |
| XR_002473691.2 | mRNA | downstream | 204994 | 15817450 ~ 15821090 (+) | True | LOC110525007 |
| XM_036979446.1 | mRNA | downstream | 220044 | 15832500 ~ 15883790 (+) | False | LOC110525313 |
| XM_036979444.1 | mRNA | downstream | 220046 | 15832502 ~ 15883790 (+) | False | LOC110525313 |
| TU541393 | other | upstream | 1595969 | 13997084 ~ 14015564 (+) | True | G476248 |
| TU541379 | other | upstream | 1626274 | 13984840 ~ 13985259 (+) | True | G476234 |
| TU540778 | other | upstream | 2297564 | 13313679 ~ 13313969 (+) | True | G475692 |
| TU539960 | other | upstream | 2898235 | 12712306 ~ 12713298 (+) | True | G474949 |
| TU539852 | other | upstream | 3107414 | 12503760 ~ 12504119 (+) | True | G474851 |
| TU544659 | other | downstream | 746960 | 16359416 ~ 16359751 (+) | True | G479239 |
| TU545301 | other | downstream | 1366726 | 16979182 ~ 16982220 (+) | True | traf1 |
| TU545405 | other | downstream | 1488530 | 17100986 ~ 17107427 (+) | True | dab2ipa |
| TU545623 | other | downstream | 1708318 | 17320774 ~ 17321165 (+) | True | G480128 |
| TU545733 | other | downstream | 1832297 | 17444753 ~ 17445931 (+) | True | G480219 |
