Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU545453 |
| length | 478 |
| lncRNA type | intronic |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G479966 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 17097964 ~ 17098959 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU545302 | lncRNA | upstream | 127572 | 16969569 ~ 16970392 (+) | True | G479823 |
| TU545379 | lncRNA | upstream | 130986 | 16966740 ~ 16966978 (+) | True | G479897 |
| TU545378 | lncRNA | upstream | 131262 | 16966366 ~ 16966702 (+) | True | G479896 |
| TU545321 | lncRNA | upstream | 234041 | 16861345 ~ 16863923 (+) | True | G479841 |
| TU545141 | lncRNA | upstream | 367172 | 16730340 ~ 16730792 (+) | True | G479678 |
| TU545550 | lncRNA | downstream | 220275 | 17319050 ~ 17319198 (+) | True | G480058 |
| TU545621 | lncRNA | downstream | 221260 | 17320035 ~ 17320254 (+) | True | G480126 |
| TU545643 | lncRNA | downstream | 224930 | 17323705 ~ 17323942 (+) | True | G480134 |
| TU545647 | lncRNA | downstream | 229743 | 17328518 ~ 17328718 (+) | True | G480138 |
| TU545648 | lncRNA | downstream | 229976 | 17328751 ~ 17328972 (+) | True | G480139 |
| XM_021605355.2 | mRNA | upstream | 94731 | 16983816 ~ 17003233 (+) | True | phf19 |
| XM_021605353.2 | mRNA | upstream | 115713 | 16970834 ~ 16982251 (+) | False | traf1 |
| XM_021605354.2 | mRNA | upstream | 115713 | 16970834 ~ 16982251 (+) | False | traf1 |
| XM_036979470.1 | mRNA | upstream | 131777 | 16846746 ~ 16966187 (+) | True | fibcd1 |
| XM_021605348.2 | mRNA | upstream | 324396 | 16769390 ~ 16773568 (+) | False | LOC110525325 |
| XR_005052027.1 | mRNA | downstream | 28180 | 17126955 ~ 17131300 (+) | True | LOC118964847 |
| XM_021605363.2 | mRNA | downstream | 126790 | 17225565 ~ 17318854 (+) | False | med27 |
| XM_021605362.2 | mRNA | downstream | 126794 | 17225569 ~ 17318854 (+) | True | med27 |
| XM_036979473.1 | mRNA | downstream | 261977 | 17360752 ~ 17412856 (+) | False | LOC110525335 |
| XM_036979474.1 | mRNA | downstream | 261977 | 17360752 ~ 17412856 (+) | False | LOC110525335 |
| TU545301 | other | upstream | 115744 | 16979182 ~ 16982220 (+) | True | traf1 |
| TU544659 | other | upstream | 738213 | 16359416 ~ 16359751 (+) | True | G479239 |
| TU541393 | other | upstream | 3082400 | 13997084 ~ 14015564 (+) | True | G476248 |
| TU541379 | other | upstream | 3112705 | 13984840 ~ 13985259 (+) | True | G476234 |
| TU540778 | other | upstream | 3783995 | 13313679 ~ 13313969 (+) | True | G475692 |
| TU545405 | other | downstream | 2211 | 17100986 ~ 17107427 (+) | True | dab2ipa |
| TU545623 | other | downstream | 221999 | 17320774 ~ 17321165 (+) | True | G480128 |
| TU545733 | other | downstream | 345978 | 17444753 ~ 17445931 (+) | True | G480219 |
| TU545556 | other | downstream | 619095 | 17717870 ~ 17718201 (+) | True | G480062 |
| TU546627 | other | downstream | 815985 | 17914760 ~ 17978399 (+) | False | LOC110525363 |
