Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU548419 |
| length | 417 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G482599 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 19280928 ~ 19281482 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU548410 | lncRNA | upstream | 5274 | 19275369 ~ 19275654 (+) | True | G482590 |
| TU548367 | lncRNA | upstream | 23625 | 19257079 ~ 19257303 (+) | True | G482549 |
| TU548366 | lncRNA | upstream | 24087 | 19256585 ~ 19256841 (+) | True | G482548 |
| TU548365 | lncRNA | upstream | 24740 | 19255984 ~ 19256188 (+) | True | G482547 |
| TU548359 | lncRNA | upstream | 31456 | 19249272 ~ 19249472 (+) | True | G482541 |
| TU548424 | lncRNA | downstream | 4855 | 19286337 ~ 19286980 (+) | False | G482603 |
| TU548426 | lncRNA | downstream | 5184 | 19286666 ~ 19286980 (+) | False | G482603 |
| TU548425 | lncRNA | downstream | 5221 | 19286703 ~ 19286980 (+) | True | G482603 |
| TU548440 | lncRNA | downstream | 33453 | 19314935 ~ 19322851 (+) | True | G482615 |
| TU548450 | lncRNA | downstream | 44000 | 19325482 ~ 19325717 (+) | True | G482625 |
| XM_021605469.2 | mRNA | upstream | 258008 | 18975768 ~ 19022920 (+) | False | LOC110525400 |
| XM_036979539.1 | mRNA | upstream | 258008 | 18975768 ~ 19022920 (+) | False | LOC110525400 |
| XM_036979540.1 | mRNA | upstream | 258008 | 18975768 ~ 19022920 (+) | False | LOC110525400 |
| XM_036979541.1 | mRNA | upstream | 258008 | 18979964 ~ 19022920 (+) | True | LOC110525400 |
| XR_005052031.1 | mRNA | upstream | 306635 | 18972352 ~ 18974293 (+) | True | LOC118964850 |
| XM_021605474.2 | mRNA | downstream | 13756 | 19295238 ~ 19304130 (+) | False | LOC110525403 |
| XM_021605472.2 | mRNA | downstream | 13796 | 19295278 ~ 19304130 (+) | True | LOC110525403 |
| LOC110525111 | mRNA | downstream | 66326 | 19347808 ~ 19349023 (+) | True | LOC110525111 |
| XM_021605478.2 | mRNA | downstream | 178549 | 19460031 ~ 19469464 (+) | True | LOC110525406 |
| XM_021605483.2 | mRNA | downstream | 222159 | 19503641 ~ 19521595 (+) | False | LOC110525411 |
| TU548369 | other | upstream | 21320 | 19259149 ~ 19259608 (+) | True | G482551 |
| TU547753 | other | upstream | 422772 | 18857627 ~ 18858156 (+) | True | G482000 |
| TU546804 | other | upstream | 940362 | 18335332 ~ 18340566 (+) | True | G481159 |
| TU546853 | other | upstream | 990461 | 18290233 ~ 18290467 (+) | True | G481205 |
| TU546849 | other | upstream | 995616 | 18284797 ~ 18285312 (+) | True | G481201 |
| TU549525 | other | downstream | 1253027 | 20534509 ~ 20537098 (+) | True | LOC110525429 |
| TU549560 | other | downstream | 1319336 | 20600818 ~ 20603002 (+) | False | LOC110525431 |
| TU549559 | other | downstream | 1319843 | 20601325 ~ 20603002 (+) | True | LOC110525431 |
| TU549652 | other | downstream | 1521294 | 20802776 ~ 20803806 (+) | True | G483669 |
| TU549738 | other | downstream | 1677273 | 20958755 ~ 20963326 (+) | True | LOC110525116 |
