Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU549572 |
| length | 269 |
| lncRNA type | read_through |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G483593 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 20620100 ~ 20706405 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU549530 | lncRNA | upstream | 49737 | 20532076 ~ 20570363 (+) | True | G483556 |
| TU549463 | lncRNA | upstream | 120941 | 20495313 ~ 20499159 (+) | True | susd1 |
| TU549458 | lncRNA | upstream | 140870 | 20477857 ~ 20479230 (+) | True | yee9 |
| TU549484 | lncRNA | upstream | 158643 | 20460714 ~ 20461457 (+) | True | G483526 |
| TU549478 | lncRNA | upstream | 167802 | 20451790 ~ 20452298 (+) | True | G483521 |
| TU549675 | lncRNA | downstream | 180502 | 20886907 ~ 20889734 (+) | True | G483690 |
| TU549712 | lncRNA | downstream | 216761 | 20923166 ~ 20924220 (+) | False | G483721 |
| TU549713 | lncRNA | downstream | 216761 | 20923166 ~ 20926045 (+) | True | G483721 |
| TU549765 | lncRNA | downstream | 294173 | 21000578 ~ 21000911 (+) | True | G483767 |
| TU549786 | lncRNA | downstream | 318261 | 21024666 ~ 21025451 (+) | False | G483778 |
| XM_021605529.2 | mRNA | upstream | 16912 | 20591803 ~ 20603188 (+) | False | LOC110525431 |
| XM_021605530.2 | mRNA | upstream | 16912 | 20591803 ~ 20603188 (+) | False | LOC110525431 |
| XM_021605531.2 | mRNA | upstream | 17901 | 20591803 ~ 20602199 (+) | False | LOC110525431 |
| XM_021605523.2 | mRNA | upstream | 56017 | 20554734 ~ 20564083 (+) | True | LOC110525428 |
| XM_021605522.2 | mRNA | upstream | 65751 | 20544990 ~ 20554349 (+) | True | poli |
| XM_021605541.2 | mRNA | downstream | 24406 | 20730811 ~ 20733970 (+) | True | mrps30 |
| XM_021605551.2 | mRNA | downstream | 34021 | 20740426 ~ 20744978 (+) | True | LOC110525442 |
| XM_021605557.2 | mRNA | downstream | 49549 | 20755954 ~ 20779577 (+) | False | prlrb |
| XM_021605555.2 | mRNA | downstream | 49550 | 20755955 ~ 20779577 (+) | False | prlrb |
| XM_036979579.1 | mRNA | downstream | 49550 | 20755955 ~ 20779577 (+) | False | prlrb |
| TU549560 | other | upstream | 17098 | 20600818 ~ 20603002 (+) | False | LOC110525431 |
| TU549559 | other | upstream | 17098 | 20601325 ~ 20603002 (+) | True | LOC110525431 |
| TU549525 | other | upstream | 83002 | 20534509 ~ 20537098 (+) | True | LOC110525429 |
| TU548369 | other | upstream | 1360492 | 19259149 ~ 19259608 (+) | True | G482551 |
| TU547753 | other | upstream | 1761944 | 18857627 ~ 18858156 (+) | True | G482000 |
| TU549652 | other | downstream | 96371 | 20802776 ~ 20803806 (+) | True | G483669 |
| TU549738 | other | downstream | 252350 | 20958755 ~ 20963326 (+) | True | LOC110525116 |
| TU550839 | other | downstream | 757734 | 21464139 ~ 21466905 (+) | True | G484674 |
| TU550899 | other | downstream | 847327 | 21553732 ~ 21554097 (+) | True | G484726 |
| TU552088 | other | downstream | 1734911 | 22441316 ~ 22444619 (+) | True | G485780 |
