Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU554433 |
| length | 352 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G487807 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 24204881 ~ 24205232 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU554431 | lncRNA | downstream | 2630 | 24201922 ~ 24202251 (-) | True | G487805 |
| TU554427 | lncRNA | downstream | 6184 | 24198066 ~ 24198697 (-) | True | G487801 |
| TU554424 | lncRNA | downstream | 9806 | 24194762 ~ 24195075 (-) | True | G487798 |
| TU554421 | lncRNA | downstream | 13407 | 24191250 ~ 24191474 (-) | True | G487795 |
| TU554271 | lncRNA | downstream | 181781 | 24019572 ~ 24023100 (-) | False | G487662 |
| TU554377 | lncRNA | upstream | 1833 | 24207065 ~ 24209281 (-) | True | G487754 |
| TU554446 | lncRNA | upstream | 29570 | 24234802 ~ 24235048 (-) | True | G487820 |
| TU554447 | lncRNA | upstream | 29971 | 24235203 ~ 24235484 (-) | True | G487821 |
| TU554452 | lncRNA | upstream | 36622 | 24241854 ~ 24242060 (-) | True | G487826 |
| TU555021 | lncRNA | upstream | 107059 | 24312291 ~ 24314486 (-) | True | G488329 |
| XM_021605790.2 | mRNA | downstream | 20512 | 24129400 ~ 24184369 (-) | False | dtx1 |
| XM_021605792.2 | mRNA | downstream | 20512 | 24129400 ~ 24184369 (-) | False | dtx1 |
| XM_021605794.2 | mRNA | downstream | 20512 | 24129400 ~ 24184369 (-) | True | dtx1 |
| XM_021605795.2 | mRNA | downstream | 22464 | 24129400 ~ 24182417 (-) | False | dtx1 |
| LOC110525317 | mRNA | downstream | 125833 | 24072614 ~ 24079048 (-) | True | LOC110525317 |
| XM_021605798.2 | mRNA | upstream | 5912 | 24211144 ~ 24224236 (-) | False | ccdc92 |
| XM_021605797.2 | mRNA | upstream | 5912 | 24211144 ~ 24224260 (-) | True | ccdc92 |
| XM_036979698.1 | mRNA | upstream | 112680 | 24317912 ~ 24504123 (-) | False | ncor2 |
| XM_036981738.1 | mRNA | upstream | 352255 | 24557487 ~ 24566324 (-) | True | LOC118965019 |
| XR_005052405.1 | mRNA | upstream | 373473 | 24578705 ~ 24579373 (-) | True | LOC118965071 |
| TU554111 | other | downstream | 487098 | 23713875 ~ 23717783 (-) | True | LOC110525552 |
| TU554033 | other | downstream | 619327 | 23583036 ~ 23585554 (-) | False | LOC110525180 |
| TU554039 | other | downstream | 619327 | 23583036 ~ 23585554 (-) | True | LOC110525180 |
| TU553494 | other | downstream | 812819 | 23390017 ~ 23392062 (-) | True | G487016 |
| TU553500 | other | downstream | 818974 | 23385534 ~ 23385907 (-) | True | G487022 |
| TU555138 | other | upstream | 148301 | 24353533 ~ 24353823 (-) | True | G488386 |
| TU555289 | other | upstream | 455665 | 24660897 ~ 24674901 (-) | False | LOC110525585 |
| TU555288 | other | upstream | 501339 | 24706571 ~ 24709420 (-) | False | LOC110525585 |
| TU555826 | other | upstream | 900973 | 25106205 ~ 25106570 (-) | True | G489038 |
| TU556319 | other | upstream | 1291731 | 25496963 ~ 25497489 (-) | True | G489511 |
