Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU561400 |
| length | 306 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G494122 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 28970906 ~ 28971211 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU560611 | lncRNA | downstream | 21769 | 28948864 ~ 28949137 (-) | True | G493419 |
| TU560603 | lncRNA | downstream | 32428 | 28938251 ~ 28938478 (-) | True | G493411 |
| TU560498 | lncRNA | downstream | 137363 | 28833311 ~ 28833543 (-) | True | G493313 |
| TU560485 | lncRNA | downstream | 146314 | 28824375 ~ 28824592 (-) | True | G493300 |
| TU560444 | lncRNA | downstream | 179409 | 28791177 ~ 28791497 (-) | True | G493259 |
| TU561408 | lncRNA | upstream | 14500 | 28985711 ~ 28985927 (-) | True | G494130 |
| TU561396 | lncRNA | upstream | 18199 | 28989410 ~ 28990733 (-) | False | LOC110525678 |
| TU561397 | lncRNA | upstream | 18339 | 28989550 ~ 28990733 (-) | True | LOC110525678 |
| TU561432 | lncRNA | upstream | 69200 | 29040411 ~ 29040803 (-) | True | G494154 |
| TU561427 | lncRNA | upstream | 99936 | 29071147 ~ 29071635 (-) | True | LOC110526490 |
| XM_036979786.1 | mRNA | downstream | 414893 | 28552264 ~ 28556013 (-) | True | zgc:153044 |
| XM_021606020.2 | mRNA | downstream | 415313 | 28552264 ~ 28555593 (-) | False | zgc:153044 |
| XM_036979787.1 | mRNA | downstream | 416515 | 28552264 ~ 28554391 (-) | False | zgc:153044 |
| XM_036979778.1 | mRNA | downstream | 503041 | 28455590 ~ 28467865 (-) | True | ube2d4 |
| XM_021606018.2 | mRNA | downstream | 503101 | 28455590 ~ 28467805 (-) | False | ube2d4 |
| XM_021606021.2 | mRNA | upstream | 18196 | 28989407 ~ 29010716 (-) | False | LOC110525678 |
| XM_036979788.1 | mRNA | upstream | 18196 | 28989407 ~ 29010716 (-) | False | LOC110525678 |
| XM_021606022.2 | mRNA | upstream | 51997 | 29023208 ~ 29070012 (-) | False | LOC110525679 |
| XM_021606024.2 | mRNA | upstream | 51997 | 29023208 ~ 29070012 (-) | True | LOC110525679 |
| XM_036979791.1 | mRNA | upstream | 99505 | 29070716 ~ 29269113 (-) | False | LOC110526490 |
| TU559292 | other | downstream | 1135604 | 27827231 ~ 27835302 (-) | False | LOC110525655 |
| TU559251 | other | downstream | 1233928 | 27734996 ~ 27736978 (-) | True | LOC110525653 |
| TU558571 | other | downstream | 1726713 | 27216607 ~ 27244193 (-) | True | G491539 |
| TU558306 | other | downstream | 2103748 | 26824867 ~ 26867158 (-) | True | G491291 |
| TU557799 | other | downstream | 2419279 | 26547222 ~ 26551627 (-) | True | LOC110525619 |
| TU561692 | other | upstream | 440004 | 29411215 ~ 29415314 (-) | True | G494389 |
| TU561696 | other | upstream | 507444 | 29478655 ~ 29483346 (-) | True | LOC110525681 |
| TU561743 | other | upstream | 531042 | 29502253 ~ 29503391 (-) | True | LOC110525684 |
| TU561865 | other | upstream | 704112 | 29675323 ~ 29675573 (-) | True | G494542 |
| TU562998 | other | upstream | 1555475 | 30526686 ~ 30527546 (-) | True | LOC110525714 |
