Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU562047 |
| length | 269 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G494712 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 29991887 ~ 29992155 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU562003 | lncRNA | downstream | 11177 | 29974486 ~ 29980710 (-) | True | G494671 |
| TU562004 | lncRNA | downstream | 23587 | 29962791 ~ 29968300 (-) | True | G494672 |
| TU562038 | lncRNA | downstream | 30526 | 29960983 ~ 29961361 (-) | True | G494703 |
| TU562037 | lncRNA | downstream | 31161 | 29960144 ~ 29960726 (-) | True | G494702 |
| TU562036 | lncRNA | downstream | 32066 | 29959613 ~ 29959821 (-) | True | G494701 |
| TU562107 | lncRNA | upstream | 110736 | 30102891 ~ 30105660 (-) | False | LOC110525706 |
| TU562108 | lncRNA | upstream | 110736 | 30102891 ~ 30141156 (-) | True | LOC110525706 |
| TU562142 | lncRNA | upstream | 171869 | 30164024 ~ 30164528 (-) | True | G494787 |
| TU562138 | lncRNA | upstream | 181675 | 30173830 ~ 30178494 (-) | False | G494785 |
| TU562137 | lncRNA | upstream | 182452 | 30174607 ~ 30179693 (-) | True | G494785 |
| XM_021606074.2 | mRNA | downstream | 11109 | 29976158 ~ 29980778 (-) | True | LOC110525703 |
| XR_005052057.1 | mRNA | downstream | 17005 | 29970067 ~ 29974882 (-) | True | LOC118964857 |
| XM_021606065.2 | mRNA | downstream | 121480 | 29863198 ~ 29870407 (-) | False | kmt5ab |
| XM_021606064.2 | mRNA | downstream | 121497 | 29863228 ~ 29870390 (-) | True | kmt5ab |
| XR_005052406.1 | mRNA | downstream | 180104 | 29798509 ~ 29811783 (-) | False | LOC118965073 |
| XM_036981739.1 | mRNA | upstream | 113210 | 30105365 ~ 30107695 (-) | False | LOC110525706 |
| XM_021606082.2 | mRNA | upstream | 197417 | 30189572 ~ 30191815 (-) | True | LOC110525709 |
| XM_036979817.1 | mRNA | upstream | 207439 | 30199594 ~ 30209590 (-) | True | sftpbb |
| XM_036981740.1 | mRNA | upstream | 318905 | 30311060 ~ 30324946 (-) | True | LOC118965020 |
| XM_021606091.2 | mRNA | upstream | 533879 | 30526034 ~ 30527686 (-) | False | LOC110525714 |
| TU561865 | other | downstream | 316314 | 29675323 ~ 29675573 (-) | True | G494542 |
| TU561743 | other | downstream | 488496 | 29502253 ~ 29503391 (-) | True | LOC110525684 |
| TU561696 | other | downstream | 508541 | 29478655 ~ 29483346 (-) | True | LOC110525681 |
| TU561692 | other | downstream | 576573 | 29411215 ~ 29415314 (-) | True | G494389 |
| TU559292 | other | downstream | 2156585 | 27827231 ~ 27835302 (-) | False | LOC110525655 |
| TU562998 | other | upstream | 534531 | 30526686 ~ 30527546 (-) | True | LOC110525714 |
| TU563013 | other | upstream | 553247 | 30545402 ~ 30549450 (-) | True | G495554 |
| TU563022 | other | upstream | 582963 | 30575118 ~ 30575573 (-) | True | G495560 |
| TU564400 | other | upstream | 1669238 | 31661393 ~ 31661618 (-) | True | G496772 |
| TU564405 | other | upstream | 1678823 | 31670978 ~ 31671927 (-) | True | G496777 |
