Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU573978 |
| length | 214 |
| lncRNA type | sense_over |
| GC content | 0.55 |
| exon number | 2 |
| gene id | G505551 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 39339859 ~ 39362610 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU573911 | lncRNA | downstream | 106019 | 39233420 ~ 39233840 (-) | True | G505491 |
| TU573912 | lncRNA | downstream | 107315 | 39232209 ~ 39232544 (-) | True | G505492 |
| TU573908 | lncRNA | downstream | 107885 | 39231642 ~ 39231974 (-) | True | G505490 |
| TU573907 | lncRNA | downstream | 109335 | 39230054 ~ 39230524 (-) | True | G505489 |
| TU573904 | lncRNA | downstream | 112626 | 39227003 ~ 39227233 (-) | True | G505486 |
| TU573925 | lncRNA | upstream | 11288 | 39373898 ~ 39388014 (-) | False | aopep |
| TU574016 | lncRNA | upstream | 32828 | 39395438 ~ 39395819 (-) | True | G505589 |
| TU574017 | lncRNA | upstream | 33382 | 39395992 ~ 39396250 (-) | True | G505590 |
| TU574033 | lncRNA | upstream | 53989 | 39416599 ~ 39416809 (-) | True | G505606 |
| TU574034 | lncRNA | upstream | 55049 | 39417659 ~ 39417885 (-) | True | G505607 |
| XM_021606433.2 | mRNA | downstream | 233238 | 39090231 ~ 39106621 (-) | True | ercc6l2 |
| XM_036980074.1 | mRNA | downstream | 306428 | 39016692 ~ 39033431 (-) | True | pnpla7b |
| XM_036980075.1 | mRNA | downstream | 307678 | 39016692 ~ 39032181 (-) | False | pnpla7b |
| XM_036980073.1 | mRNA | downstream | 324358 | 39008111 ~ 39015501 (-) | True | LOC110525916 |
| XR_005052095.1 | mRNA | downstream | 324359 | 39006183 ~ 39015500 (-) | False | LOC110525916 |
| XM_036980087.1 | mRNA | upstream | 77942 | 39440552 ~ 39517123 (-) | False | dock8 |
| XM_036980088.1 | mRNA | upstream | 77942 | 39440552 ~ 39517123 (-) | True | dock8 |
| XM_021606443.2 | mRNA | upstream | 256672 | 39619282 ~ 39670076 (-) | True | LOC110525926 |
| XM_036980091.1 | mRNA | upstream | 316884 | 39679494 ~ 39697830 (-) | False | ndufaf2 |
| XM_036980090.1 | mRNA | upstream | 316884 | 39679494 ~ 39715116 (-) | True | ndufaf2 |
| TU573913 | other | downstream | 106649 | 39232693 ~ 39233210 (-) | True | G505493 |
| TU573890 | other | downstream | 133590 | 39205878 ~ 39206269 (-) | True | G505472 |
| TU573476 | other | downstream | 372456 | 38954870 ~ 38967403 (-) | True | nsmfb |
| TU571387 | other | downstream | 2003307 | 37331484 ~ 37336552 (-) | False | G503159 |
| TU571292 | other | downstream | 2098922 | 37239844 ~ 37240937 (-) | True | G503064 |
| TU573926 | other | upstream | 59058 | 39421668 ~ 39423490 (-) | True | aopep |
| TU575200 | other | upstream | 261075 | 39623685 ~ 39624344 (-) | True | G506641 |
| TU575254 | other | upstream | 400681 | 39763291 ~ 39764776 (-) | True | LOC110525929 |
| TU575314 | other | upstream | 475038 | 39837648 ~ 39838160 (-) | True | LOC110525932 |
| TU575349 | other | upstream | 524412 | 39887022 ~ 39889931 (-) | True | G506785 |
