Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU575198 |
| length | 354 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G506639 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 39616938 ~ 39617291 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU574184 | lncRNA | downstream | 9141 | 39607572 ~ 39607797 (-) | True | G505752 |
| TU574180 | lncRNA | downstream | 12547 | 39604097 ~ 39604391 (-) | True | G505748 |
| TU574175 | lncRNA | downstream | 16751 | 39599927 ~ 39600187 (-) | True | G505743 |
| TU574171 | lncRNA | downstream | 20925 | 39595797 ~ 39596013 (-) | True | G505739 |
| TU574143 | lncRNA | downstream | 81469 | 39534116 ~ 39535469 (-) | True | G505711 |
| TU575359 | lncRNA | upstream | 288258 | 39905549 ~ 39905853 (-) | True | G506795 |
| TU575369 | lncRNA | upstream | 315229 | 39932520 ~ 39932855 (-) | True | G506802 |
| TU575372 | lncRNA | upstream | 330210 | 39947501 ~ 39947725 (-) | True | G506805 |
| TU575373 | lncRNA | upstream | 334408 | 39951699 ~ 39951922 (-) | True | G506806 |
| TU575435 | lncRNA | upstream | 431338 | 40048629 ~ 40048833 (-) | True | G506865 |
| XM_036980087.1 | mRNA | downstream | 99815 | 39440552 ~ 39517123 (-) | False | dock8 |
| XM_036980088.1 | mRNA | downstream | 99815 | 39440552 ~ 39517123 (-) | True | dock8 |
| XR_005052099.1 | mRNA | downstream | 181967 | 39320918 ~ 39434971 (-) | False | aopep |
| XM_036980086.1 | mRNA | downstream | 181967 | 39340105 ~ 39434971 (-) | False | aopep |
| XR_005052098.1 | mRNA | downstream | 181968 | 39313471 ~ 39434970 (-) | False | aopep |
| XM_021606443.2 | mRNA | upstream | 1991 | 39619282 ~ 39670076 (-) | True | LOC110525926 |
| XM_036980091.1 | mRNA | upstream | 62203 | 39679494 ~ 39697830 (-) | False | ndufaf2 |
| XM_036980090.1 | mRNA | upstream | 62203 | 39679494 ~ 39715116 (-) | True | ndufaf2 |
| XM_021606452.2 | mRNA | upstream | 134435 | 39751726 ~ 39778537 (-) | False | LOC110525929 |
| XM_021606450.2 | mRNA | upstream | 134435 | 39751726 ~ 39778538 (-) | False | LOC110525929 |
| TU573926 | other | downstream | 193448 | 39421668 ~ 39423490 (-) | True | aopep |
| TU573913 | other | downstream | 383728 | 39232693 ~ 39233210 (-) | True | G505493 |
| TU573890 | other | downstream | 410669 | 39205878 ~ 39206269 (-) | True | G505472 |
| TU573476 | other | downstream | 649535 | 38954870 ~ 38967403 (-) | True | nsmfb |
| TU571387 | other | downstream | 2280386 | 37331484 ~ 37336552 (-) | False | G503159 |
| TU575200 | other | upstream | 6394 | 39623685 ~ 39624344 (-) | True | G506641 |
| TU575254 | other | upstream | 146000 | 39763291 ~ 39764776 (-) | True | LOC110525929 |
| TU575314 | other | upstream | 220357 | 39837648 ~ 39838160 (-) | True | LOC110525932 |
| TU575349 | other | upstream | 269731 | 39887022 ~ 39889931 (-) | True | G506785 |
| TU575676 | other | upstream | 923368 | 40540659 ~ 40542329 (-) | True | G507063 |
