Item | Value |
---|---|
RNA id | TU574780 |
length | 209 |
lncRNA type | intronic |
GC content | 0.36 |
exon number | 1 |
gene id | G506254 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 40477015 ~ 40477223 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU574777 | lncRNA | upstream | 2876 | 40473106 ~ 40474139 (+) | True | G506251 |
TU574776 | lncRNA | upstream | 4588 | 40472001 ~ 40472427 (+) | True | G506250 |
TU574719 | lncRNA | upstream | 66036 | 40409253 ~ 40410979 (+) | True | G506198 |
TU574739 | lncRNA | upstream | 70130 | 40395345 ~ 40406885 (+) | True | G506216 |
TU574725 | lncRNA | upstream | 141467 | 40334257 ~ 40335548 (+) | True | LOC118965077 |
TU574775 | lncRNA | downstream | 13355 | 40490578 ~ 40490918 (+) | True | G506249 |
TU574774 | lncRNA | downstream | 14123 | 40491346 ~ 40491768 (+) | True | G506248 |
TU574773 | lncRNA | downstream | 14804 | 40492027 ~ 40493232 (+) | True | G506247 |
TU574787 | lncRNA | downstream | 26891 | 40504114 ~ 40506084 (+) | False | LOC110525959 |
TU574788 | lncRNA | downstream | 26891 | 40504114 ~ 40506084 (+) | True | LOC110525959 |
XR_002473848.2 | mRNA | upstream | 1107 | 40469471 ~ 40475908 (+) | True | LOC110525958 |
XM_036980110.1 | mRNA | upstream | 24853 | 40449567 ~ 40452162 (+) | True | LOC110515135 |
XM_036980109.1 | mRNA | upstream | 36104 | 40438659 ~ 40440911 (+) | True | LOC110525956 |
XM_021608082.2 | mRNA | upstream | 59571 | 40414867 ~ 40417444 (+) | True | LOC110526900 |
XM_021604988.2 | mRNA | upstream | 104254 | 40370165 ~ 40372761 (+) | True | LOC110525029 |
XM_036980112.1 | mRNA | downstream | 23434 | 40500657 ~ 40505498 (+) | False | LOC110525959 |
XM_036980111.1 | mRNA | downstream | 23434 | 40500657 ~ 40506112 (+) | False | LOC110525959 |
XM_021606493.1 | mRNA | downstream | 40368 | 40517591 ~ 40519539 (+) | True | avp |
XM_021606494.2 | mRNA | downstream | 43751 | 40520974 ~ 40524282 (+) | True | ccl27a |
XM_036980113.1 | mRNA | downstream | 50615 | 40527838 ~ 40533844 (+) | False | slc35d2 |
TU574667 | other | upstream | 217965 | 40257067 ~ 40259050 (+) | True | LOC110525949 |
TU574576 | other | upstream | 273129 | 40196800 ~ 40203886 (+) | True | G506095 |
TU574449 | other | upstream | 513917 | 39962652 ~ 39963098 (+) | True | G505988 |
TU574282 | other | upstream | 728535 | 39734784 ~ 39748480 (+) | True | LOC110525928 |
TU574237 | other | upstream | 796984 | 39674012 ~ 39680031 (+) | True | LOC110525927 |
TU574816 | other | downstream | 67640 | 40544863 ~ 40547513 (+) | False | G506281 |
TU574820 | other | downstream | 88844 | 40566067 ~ 40566429 (+) | True | G506285 |
TU574791 | other | downstream | 91503 | 40568726 ~ 40859522 (+) | True | fbxl17 |
TU576412 | other | downstream | 992328 | 41469551 ~ 41471408 (+) | True | G507768 |
TU577295 | other | downstream | 1652002 | 42129225 ~ 42131940 (+) | True | G508559 |