Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU574774 |
| length | 423 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G506248 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 40491346 ~ 40491768 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU574775 | lncRNA | upstream | 428 | 40490578 ~ 40490918 (+) | True | G506249 |
| TU574780 | lncRNA | upstream | 14123 | 40477015 ~ 40477223 (+) | True | G506254 |
| TU574777 | lncRNA | upstream | 17207 | 40473106 ~ 40474139 (+) | True | G506251 |
| TU574776 | lncRNA | upstream | 18919 | 40472001 ~ 40472427 (+) | True | G506250 |
| TU574719 | lncRNA | upstream | 80367 | 40409253 ~ 40410979 (+) | True | G506198 |
| TU574773 | lncRNA | downstream | 259 | 40492027 ~ 40493232 (+) | True | G506247 |
| TU574787 | lncRNA | downstream | 12346 | 40504114 ~ 40506084 (+) | False | LOC110525959 |
| TU574788 | lncRNA | downstream | 12346 | 40504114 ~ 40506084 (+) | True | LOC110525959 |
| TU574808 | lncRNA | downstream | 40327 | 40532095 ~ 40532555 (+) | False | slc35d2 |
| TU574811 | lncRNA | downstream | 40327 | 40532095 ~ 40532632 (+) | True | slc35d2 |
| XM_021606490.2 | mRNA | upstream | 1494 | 40476037 ~ 40489852 (+) | True | LOC110525957 |
| XR_002473848.2 | mRNA | upstream | 15438 | 40469471 ~ 40475908 (+) | True | LOC110525958 |
| XM_036980110.1 | mRNA | upstream | 39184 | 40449567 ~ 40452162 (+) | True | LOC110515135 |
| XM_036980109.1 | mRNA | upstream | 50435 | 40438659 ~ 40440911 (+) | True | LOC110525956 |
| XM_021608082.2 | mRNA | upstream | 73902 | 40414867 ~ 40417444 (+) | True | LOC110526900 |
| XM_036980112.1 | mRNA | downstream | 8889 | 40500657 ~ 40505498 (+) | False | LOC110525959 |
| XM_036980111.1 | mRNA | downstream | 8889 | 40500657 ~ 40506112 (+) | False | LOC110525959 |
| XM_021606493.1 | mRNA | downstream | 25823 | 40517591 ~ 40519539 (+) | True | avp |
| XM_021606494.2 | mRNA | downstream | 29206 | 40520974 ~ 40524282 (+) | True | ccl27a |
| XM_036980113.1 | mRNA | downstream | 36070 | 40527838 ~ 40533844 (+) | False | slc35d2 |
| TU574667 | other | upstream | 232296 | 40257067 ~ 40259050 (+) | True | LOC110525949 |
| TU574576 | other | upstream | 287460 | 40196800 ~ 40203886 (+) | True | G506095 |
| TU574449 | other | upstream | 528248 | 39962652 ~ 39963098 (+) | True | G505988 |
| TU574282 | other | upstream | 742866 | 39734784 ~ 39748480 (+) | True | LOC110525928 |
| TU574237 | other | upstream | 811315 | 39674012 ~ 39680031 (+) | True | LOC110525927 |
| TU574816 | other | downstream | 53095 | 40544863 ~ 40547513 (+) | False | G506281 |
| TU574820 | other | downstream | 74299 | 40566067 ~ 40566429 (+) | True | G506285 |
| TU574791 | other | downstream | 76958 | 40568726 ~ 40859522 (+) | True | fbxl17 |
| TU576412 | other | downstream | 977783 | 41469551 ~ 41471408 (+) | True | G507768 |
| TU577295 | other | downstream | 1637457 | 42129225 ~ 42131940 (+) | True | G508559 |
