Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU574815 |
| length | 350 |
| lncRNA type | antisense_over |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G506281 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 40544863 ~ 40547513 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU574814 | lncRNA | upstream | 5410 | 40540501 ~ 40540903 (+) | True | G506280 |
| TU574811 | lncRNA | upstream | 13681 | 40532095 ~ 40532632 (+) | True | slc35d2 |
| TU574808 | lncRNA | upstream | 13758 | 40532095 ~ 40532555 (+) | False | slc35d2 |
| TU574787 | lncRNA | upstream | 40229 | 40504114 ~ 40506084 (+) | False | LOC110525959 |
| TU574788 | lncRNA | upstream | 40229 | 40504114 ~ 40506084 (+) | True | LOC110525959 |
| TU574876 | lncRNA | downstream | 90320 | 40637833 ~ 40639089 (+) | True | G506336 |
| TU574923 | lncRNA | downstream | 152547 | 40700060 ~ 40700389 (+) | True | G506382 |
| TU574965 | lncRNA | downstream | 216976 | 40764489 ~ 40766041 (+) | True | G506417 |
| TU575020 | lncRNA | downstream | 313577 | 40861090 ~ 40940073 (+) | True | G506471 |
| TU575065 | lncRNA | downstream | 370476 | 40917989 ~ 40925687 (+) | True | G506511 |
| XM_036980113.1 | mRNA | upstream | 12469 | 40527838 ~ 40533844 (+) | False | slc35d2 |
| XM_021606496.2 | mRNA | upstream | 12469 | 40528317 ~ 40533844 (+) | False | slc35d2 |
| XM_021606494.2 | mRNA | upstream | 22031 | 40520974 ~ 40524282 (+) | True | ccl27a |
| XM_021606493.1 | mRNA | upstream | 26774 | 40517591 ~ 40519539 (+) | True | avp |
| XM_036980111.1 | mRNA | upstream | 40201 | 40500657 ~ 40506112 (+) | False | LOC110525959 |
| XM_036980121.1 | mRNA | downstream | 21124 | 40568637 ~ 40886427 (+) | False | fbxl17 |
| XM_036980122.1 | mRNA | downstream | 21125 | 40568638 ~ 40671271 (+) | False | fbxl17 |
| XM_036980120.1 | mRNA | downstream | 21128 | 40568641 ~ 40886427 (+) | False | fbxl17 |
| XM_021606509.2 | mRNA | downstream | 21133 | 40568646 ~ 40886427 (+) | False | fbxl17 |
| XM_036980124.1 | mRNA | downstream | 427866 | 40975379 ~ 41084448 (+) | False | efna5b |
| TU574667 | other | upstream | 287263 | 40257067 ~ 40259050 (+) | True | LOC110525949 |
| TU574576 | other | upstream | 342427 | 40196800 ~ 40203886 (+) | True | G506095 |
| TU574449 | other | upstream | 583215 | 39962652 ~ 39963098 (+) | True | G505988 |
| TU574282 | other | upstream | 797833 | 39734784 ~ 39748480 (+) | True | LOC110525928 |
| TU574237 | other | upstream | 866282 | 39674012 ~ 39680031 (+) | True | LOC110525927 |
| TU574820 | other | downstream | 18554 | 40566067 ~ 40566429 (+) | True | G506285 |
| TU574791 | other | downstream | 21213 | 40568726 ~ 40859522 (+) | True | fbxl17 |
| TU576412 | other | downstream | 922038 | 41469551 ~ 41471408 (+) | True | G507768 |
| TU577295 | other | downstream | 1581712 | 42129225 ~ 42131940 (+) | True | G508559 |
| TU577938 | other | downstream | 2019592 | 42567105 ~ 42569384 (+) | False | G509160 |
