Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU577831 |
| length | 805 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G509062 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 42421342 ~ 42422146 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU577830 | lncRNA | upstream | 159 | 42419592 ~ 42421183 (+) | True | G509061 |
| TU577829 | lncRNA | upstream | 2366 | 42418721 ~ 42418976 (+) | True | G509060 |
| TU577466 | lncRNA | upstream | 49149 | 42371964 ~ 42372193 (+) | True | G508717 |
| TU577424 | lncRNA | upstream | 88849 | 42319892 ~ 42332493 (+) | True | G508677 |
| TU577294 | lncRNA | upstream | 274098 | 42145407 ~ 42147244 (+) | True | G508558 |
| TU577833 | lncRNA | downstream | 6159 | 42428305 ~ 42428596 (+) | True | G509064 |
| TU577837 | lncRNA | downstream | 10215 | 42432361 ~ 42432614 (+) | True | G509068 |
| TU577839 | lncRNA | downstream | 14068 | 42436214 ~ 42436446 (+) | True | G509070 |
| TU577847 | lncRNA | downstream | 20220 | 42442366 ~ 42442584 (+) | True | G509077 |
| TU577848 | lncRNA | downstream | 20968 | 42443114 ~ 42443323 (+) | True | G509078 |
| XM_021606545.1 | mRNA | upstream | 6234 | 42372531 ~ 42415108 (+) | False | stxbp1b |
| XM_021606548.1 | mRNA | upstream | 6234 | 42372531 ~ 42415108 (+) | True | stxbp1b |
| XM_021606542.2 | mRNA | upstream | 172076 | 42244505 ~ 42249266 (+) | True | LOC110525988 |
| XM_021606540.2 | mRNA | upstream | 277734 | 42139067 ~ 42143608 (+) | False | paxx |
| XM_036980149.1 | mRNA | downstream | 181162 | 42603308 ~ 42643804 (+) | False | camsap1b |
| XM_036980147.1 | mRNA | downstream | 181163 | 42603309 ~ 42645904 (+) | False | camsap1b |
| XM_036980148.1 | mRNA | downstream | 181163 | 42603309 ~ 42645904 (+) | True | camsap1b |
| XM_021606561.2 | mRNA | downstream | 223888 | 42646034 ~ 42651728 (+) | False | LOC110525996 |
| XR_005052112.1 | mRNA | downstream | 357115 | 42779261 ~ 42780791 (+) | True | LOC118964872 |
| TU577295 | other | upstream | 289402 | 42129225 ~ 42131940 (+) | True | G508559 |
| TU576412 | other | upstream | 949934 | 41469551 ~ 41471408 (+) | True | G507768 |
| TU574791 | other | upstream | 1561820 | 40568726 ~ 40859522 (+) | True | fbxl17 |
| TU574820 | other | upstream | 1854913 | 40566067 ~ 40566429 (+) | True | G506285 |
| TU574816 | other | upstream | 1873829 | 40544863 ~ 40547513 (+) | False | G506281 |
| TU577938 | other | downstream | 144959 | 42567105 ~ 42569384 (+) | False | G509160 |
| TU577937 | other | downstream | 145102 | 42567248 ~ 42570169 (+) | True | G509160 |
| TU579244 | other | downstream | 1235322 | 43657468 ~ 43658493 (+) | True | G510416 |
| TU581131 | other | downstream | 2762293 | 45184439 ~ 45185869 (+) | True | G512192 |
| TU581209 | other | downstream | 2795581 | 45217727 ~ 45220782 (+) | False | LOC110526028 |
