Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU577850 |
| length | 208 |
| lncRNA type | intronic |
| GC content | 0.55 |
| exon number | 1 |
| gene id | G509080 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 42445230 ~ 42445437 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU577848 | lncRNA | upstream | 1907 | 42443114 ~ 42443323 (+) | True | G509078 |
| TU577847 | lncRNA | upstream | 2646 | 42442366 ~ 42442584 (+) | True | G509077 |
| TU577839 | lncRNA | upstream | 8784 | 42436214 ~ 42436446 (+) | True | G509070 |
| TU577837 | lncRNA | upstream | 12616 | 42432361 ~ 42432614 (+) | True | G509068 |
| TU577833 | lncRNA | upstream | 16634 | 42428305 ~ 42428596 (+) | True | G509064 |
| TU577924 | lncRNA | downstream | 102794 | 42548231 ~ 42549226 (+) | True | G509148 |
| TU577939 | lncRNA | downstream | 125122 | 42570559 ~ 42573399 (+) | True | G509161 |
| TU577941 | lncRNA | downstream | 131116 | 42576553 ~ 42576898 (+) | True | G509163 |
| TU577942 | lncRNA | downstream | 132782 | 42578219 ~ 42588368 (+) | True | G509164 |
| TU577966 | lncRNA | downstream | 206194 | 42651631 ~ 42655499 (+) | True | LOC110525996 |
| XM_021606545.1 | mRNA | upstream | 30122 | 42372531 ~ 42415108 (+) | False | stxbp1b |
| XM_021606548.1 | mRNA | upstream | 30122 | 42372531 ~ 42415108 (+) | True | stxbp1b |
| XM_021606542.2 | mRNA | upstream | 195964 | 42244505 ~ 42249266 (+) | True | LOC110525988 |
| XM_021606540.2 | mRNA | upstream | 301622 | 42139067 ~ 42143608 (+) | False | paxx |
| XM_036980149.1 | mRNA | downstream | 157871 | 42603308 ~ 42643804 (+) | False | camsap1b |
| XM_036980147.1 | mRNA | downstream | 157872 | 42603309 ~ 42645904 (+) | False | camsap1b |
| XM_036980148.1 | mRNA | downstream | 157872 | 42603309 ~ 42645904 (+) | True | camsap1b |
| XM_021606561.2 | mRNA | downstream | 200597 | 42646034 ~ 42651728 (+) | False | LOC110525996 |
| XR_005052112.1 | mRNA | downstream | 333824 | 42779261 ~ 42780791 (+) | True | LOC118964872 |
| TU577295 | other | upstream | 313290 | 42129225 ~ 42131940 (+) | True | G508559 |
| TU576412 | other | upstream | 973822 | 41469551 ~ 41471408 (+) | True | G507768 |
| TU574791 | other | upstream | 1585708 | 40568726 ~ 40859522 (+) | True | fbxl17 |
| TU574820 | other | upstream | 1878801 | 40566067 ~ 40566429 (+) | True | G506285 |
| TU574816 | other | upstream | 1897717 | 40544863 ~ 40547513 (+) | False | G506281 |
| TU577938 | other | downstream | 121668 | 42567105 ~ 42569384 (+) | False | G509160 |
| TU577937 | other | downstream | 121811 | 42567248 ~ 42570169 (+) | True | G509160 |
| TU579244 | other | downstream | 1212031 | 43657468 ~ 43658493 (+) | True | G510416 |
| TU581131 | other | downstream | 2739002 | 45184439 ~ 45185869 (+) | True | G512192 |
| TU581209 | other | downstream | 2772290 | 45217727 ~ 45220782 (+) | False | LOC110526028 |
