Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU578049 |
| length | 1200 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 1 |
| gene id | G509260 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 42742014 ~ 42743213 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU578045 | lncRNA | upstream | 7157 | 42734594 ~ 42734857 (+) | True | G509256 |
| TU578041 | lncRNA | upstream | 11865 | 42729920 ~ 42730149 (+) | True | G509252 |
| TU577966 | lncRNA | upstream | 86515 | 42651631 ~ 42655499 (+) | True | LOC110525996 |
| TU577942 | lncRNA | upstream | 153646 | 42578219 ~ 42588368 (+) | True | G509164 |
| TU577941 | lncRNA | upstream | 165116 | 42576553 ~ 42576898 (+) | True | G509163 |
| TU578055 | lncRNA | downstream | 6818 | 42750031 ~ 42750268 (+) | True | G509266 |
| TU578056 | lncRNA | downstream | 8195 | 42751408 ~ 42751614 (+) | True | G509267 |
| TU578061 | lncRNA | downstream | 13553 | 42756766 ~ 42756971 (+) | True | G509272 |
| TU578299 | lncRNA | downstream | 22907 | 42766120 ~ 42766348 (+) | True | G509500 |
| TU578501 | lncRNA | downstream | 227343 | 42970556 ~ 42970917 (+) | True | G509697 |
| XM_021606561.2 | mRNA | upstream | 90286 | 42646034 ~ 42651728 (+) | False | LOC110525996 |
| XM_036980147.1 | mRNA | upstream | 96110 | 42603309 ~ 42645904 (+) | False | camsap1b |
| XM_036980148.1 | mRNA | upstream | 96110 | 42603309 ~ 42645904 (+) | True | camsap1b |
| XM_036980149.1 | mRNA | upstream | 98210 | 42603308 ~ 42643804 (+) | False | camsap1b |
| XM_021606548.1 | mRNA | upstream | 326906 | 42372531 ~ 42415108 (+) | True | stxbp1b |
| XR_005052112.1 | mRNA | downstream | 36048 | 42779261 ~ 42780791 (+) | True | LOC118964872 |
| XM_021606571.2 | mRNA | downstream | 67101 | 42810314 ~ 42825158 (+) | True | LOC110525999 |
| XM_036981749.1 | mRNA | downstream | 86598 | 42829811 ~ 42836106 (+) | True | LOC118965026 |
| XM_021606572.2 | mRNA | downstream | 110574 | 42853787 ~ 42992231 (+) | False | col27a1b |
| XR_005052415.1 | mRNA | downstream | 280650 | 43023863 ~ 43024698 (+) | False | LOC118965079 |
| TU577937 | other | upstream | 171845 | 42567248 ~ 42570169 (+) | True | G509160 |
| TU577938 | other | upstream | 172630 | 42567105 ~ 42569384 (+) | False | G509160 |
| TU577295 | other | upstream | 610074 | 42129225 ~ 42131940 (+) | True | G508559 |
| TU576412 | other | upstream | 1270606 | 41469551 ~ 41471408 (+) | True | G507768 |
| TU574791 | other | upstream | 1882492 | 40568726 ~ 40859522 (+) | True | fbxl17 |
| TU579244 | other | downstream | 914255 | 43657468 ~ 43658493 (+) | True | G510416 |
| TU581131 | other | downstream | 2441226 | 45184439 ~ 45185869 (+) | True | G512192 |
| TU581209 | other | downstream | 2474514 | 45217727 ~ 45220782 (+) | False | LOC110526028 |
| TU581924 | other | downstream | 2892376 | 45635589 ~ 45636250 (+) | True | G512912 |
| TU582342 | other | downstream | 3443787 | 46187000 ~ 46190292 (+) | True | LOC110526042 |
