Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU580156 |
| length | 412 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G511284 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 44349125 ~ 44350035 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU580152 | lncRNA | upstream | 6699 | 44339920 ~ 44342925 (+) | True | G511281 |
| TU580150 | lncRNA | upstream | 11210 | 44337537 ~ 44338414 (+) | True | LOC110526014 |
| TU580124 | lncRNA | upstream | 65029 | 44284251 ~ 44284595 (+) | True | G511256 |
| TU580112 | lncRNA | upstream | 71317 | 44277848 ~ 44278307 (+) | True | G511249 |
| TU580110 | lncRNA | upstream | 74808 | 44274417 ~ 44274816 (+) | True | G511247 |
| TU580155 | lncRNA | downstream | 213 | 44350248 ~ 44351084 (+) | True | G511283 |
| TU580158 | lncRNA | downstream | 2515 | 44352550 ~ 44352753 (+) | True | G511285 |
| TU580277 | lncRNA | downstream | 15940 | 44365975 ~ 44367235 (+) | True | G511389 |
| TU580307 | lncRNA | downstream | 61797 | 44411832 ~ 44432361 (+) | True | G511417 |
| TU580321 | lncRNA | downstream | 86303 | 44436338 ~ 44438861 (+) | False | G511430 |
| XM_021606591.2 | mRNA | upstream | 837 | 44345482 ~ 44348787 (+) | True | LOC110526013 |
| XR_002473857.2 | mRNA | upstream | 9835 | 44337726 ~ 44339789 (+) | False | LOC110526014 |
| XM_021606590.2 | mRNA | upstream | 40264 | 44295614 ~ 44309360 (+) | True | LOC110526012 |
| XM_021606586.2 | mRNA | upstream | 54386 | 44284852 ~ 44295238 (+) | False | LOC110526009 |
| XR_005052115.1 | mRNA | downstream | 380032 | 44730067 ~ 44740572 (+) | False | LOC110526020 |
| XR_005052117.1 | mRNA | downstream | 523350 | 44873385 ~ 44891032 (+) | False | LOC110526024 |
| XR_005052116.1 | mRNA | downstream | 523350 | 44873385 ~ 44891045 (+) | False | LOC110526024 |
| XR_002473860.2 | mRNA | downstream | 523350 | 44873385 ~ 44891056 (+) | False | LOC110526024 |
| XM_021606601.2 | mRNA | downstream | 523351 | 44873386 ~ 44891321 (+) | False | LOC110526024 |
| TU579244 | other | upstream | 691131 | 43657468 ~ 43658493 (+) | True | G510416 |
| TU577937 | other | upstream | 1779455 | 42567248 ~ 42570169 (+) | True | G509160 |
| TU577938 | other | upstream | 1780240 | 42567105 ~ 42569384 (+) | False | G509160 |
| TU577295 | other | upstream | 2217684 | 42129225 ~ 42131940 (+) | True | G508559 |
| TU576412 | other | upstream | 2878216 | 41469551 ~ 41471408 (+) | True | G507768 |
| TU581131 | other | downstream | 834404 | 45184439 ~ 45185869 (+) | True | G512192 |
| TU581209 | other | downstream | 867692 | 45217727 ~ 45220782 (+) | False | LOC110526028 |
| TU581924 | other | downstream | 1285554 | 45635589 ~ 45636250 (+) | True | G512912 |
| TU582342 | other | downstream | 1836965 | 46187000 ~ 46190292 (+) | True | LOC110526042 |
| TU582564 | other | downstream | 2009921 | 46359956 ~ 46360585 (+) | True | G513501 |
