Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU582204 |
| length | 270 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G513163 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 45799460 ~ 45799729 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
45,797,600
45,798,000
45,798,400
45,798,800
45,799,200
45,799,600
45,800,000
45,800,400
45,800,800
45,801,200
45,801,600
45,802,000
NC_048570.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU582202 | lncRNA | downstream | 2048 | 45797178 ~ 45797412 (-) | True | G513161 |
| TU582200 | lncRNA | downstream | 3316 | 45795802 ~ 45796144 (-) | True | G513159 |
| TU582163 | lncRNA | downstream | 46565 | 45752667 ~ 45752895 (-) | True | G513123 |
| TU582162 | lncRNA | downstream | 47088 | 45751909 ~ 45752372 (-) | True | G513122 |
| TU582154 | lncRNA | downstream | 54056 | 45745202 ~ 45745404 (-) | True | G513114 |
| TU582210 | lncRNA | upstream | 6005 | 45805734 ~ 45805966 (-) | True | G513169 |
| TU582851 | lncRNA | upstream | 148313 | 45948042 ~ 45979860 (-) | True | G513773 |
| TU583012 | lncRNA | upstream | 338429 | 46138158 ~ 46140055 (-) | False | G513925 |
| TU583013 | lncRNA | upstream | 338675 | 46138404 ~ 46140055 (-) | True | G513925 |
| TU583028 | lncRNA | upstream | 366861 | 46166590 ~ 46166796 (-) | True | G513940 |
| LOC118965028 | mRNA | downstream | 24532 | 45765669 ~ 45774928 (-) | True | LOC118965028 |
| XM_036980194.1 | mRNA | downstream | 56365 | 45655985 ~ 45743095 (-) | False | LOC110526035 |
| XM_021606628.2 | mRNA | upstream | 51501 | 45851230 ~ 45863241 (-) | True | LOC110526037 |
| XM_036979104.1 | mRNA | upstream | 104322 | 45904051 ~ 45906832 (-) | False | LOC100136024 |
| NM_001124347.2 | mRNA | upstream | 104337 | 45904066 ~ 45907159 (-) | True | LOC100136024 |
| XM_021606629.2 | mRNA | upstream | 116043 | 45915772 ~ 45954751 (-) | True | LOC110526038 |
| XR_005052123.1 | mRNA | upstream | 174044 | 45973773 ~ 45995385 (-) | False | LOC110526039 |
| TU581656 | other | downstream | 523073 | 45274638 ~ 45276387 (-) | True | znrf3 |
| TU580171 | other | downstream | 1587637 | 44209465 ~ 44211823 (-) | False | nf2a |
| TU580173 | other | downstream | 1588795 | 44209338 ~ 44210665 (-) | False | nf2a |
| TU580172 | other | downstream | 1588795 | 44209465 ~ 44210665 (-) | True | nf2a |
| TU579749 | other | downstream | 1851071 | 43946338 ~ 43948389 (-) | True | prodhb |
| TU583050 | other | upstream | 560159 | 46359888 ~ 46360886 (-) | True | apba1a |
| TU583053 | other | upstream | 570961 | 46370690 ~ 46430360 (-) | True | LOC110526044 |
| TU583552 | other | upstream | 1110929 | 46910658 ~ 46910950 (-) | True | G514434 |
| TU583955 | other | upstream | 1216433 | 47016162 ~ 47016496 (-) | True | G514777 |
| TU584295 | other | upstream | 2175064 | 47974793 ~ 47976975 (-) | True | G515094 |
