Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU584295 |
| length | 950 |
| RNA type | TUCP |
| GC content | 0.54 |
| exon number | 5 |
| gene id | G515094 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 47974793 ~ 47976975 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
47,974,000
47,975,000
47,976,000
47,977,000
47,978,000
47,979,000
47,980,000
47,981,000
47,982,000
NC_048570.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU584266 | lncRNA | downstream | 31793 | 47942749 ~ 47943000 (-) | True | G515067 |
| TU584263 | lncRNA | downstream | 248543 | 47726033 ~ 47726250 (-) | True | G515064 |
| TU584259 | lncRNA | downstream | 253304 | 47721224 ~ 47721489 (-) | True | G515060 |
| TU584257 | lncRNA | downstream | 257945 | 47716037 ~ 47716848 (-) | True | G515058 |
| TU584247 | lncRNA | downstream | 272264 | 47702308 ~ 47702529 (-) | True | G515049 |
| TU584301 | lncRNA | upstream | 10159 | 47987134 ~ 47987356 (-) | True | G515099 |
| TU584305 | lncRNA | upstream | 17514 | 47994489 ~ 47994807 (-) | True | G515103 |
| TU584306 | lncRNA | upstream | 19834 | 47996809 ~ 47997066 (-) | True | G515104 |
| TU584331 | lncRNA | upstream | 281356 | 48258331 ~ 48286378 (-) | True | G515121 |
| TU584334 | lncRNA | upstream | 288195 | 48265170 ~ 48266108 (-) | True | G515123 |
| XR_005052134.1 | mRNA | downstream | 40476 | 47933538 ~ 47934317 (-) | True | LOC118964890 |
| XR_005052129.1 | mRNA | downstream | 285541 | 47688651 ~ 47689252 (-) | True | LOC118964882 |
| XR_005052131.1 | mRNA | downstream | 308269 | 47665814 ~ 47666524 (-) | False | LOC118964884 |
| XR_005052130.1 | mRNA | downstream | 440267 | 47533816 ~ 47534526 (-) | True | LOC118964883 |
| XM_036980273.1 | mRNA | downstream | 463783 | 47507163 ~ 47511010 (-) | True | LOC118964878 |
| XM_036981756.1 | mRNA | upstream | 39329 | 48016304 ~ 48017854 (-) | True | LOC118965031 |
| XM_036980314.1 | mRNA | upstream | 320542 | 48297517 ~ 48318495 (-) | False | LOC110512142 |
| XM_036981757.1 | mRNA | upstream | 369889 | 48346864 ~ 48348019 (-) | True | LOC118965032 |
| XR_005052141.1 | mRNA | upstream | 371734 | 48348709 ~ 48353264 (-) | True | LOC118964894 |
| XM_036980319.1 | mRNA | upstream | 401410 | 48378385 ~ 48381337 (-) | False | LOC118964892 |
| TU583955 | other | downstream | 958297 | 47016162 ~ 47016496 (-) | True | G514777 |
| TU583552 | other | downstream | 1063843 | 46910658 ~ 46910950 (-) | True | G514434 |
| TU583053 | other | downstream | 1544433 | 46370690 ~ 46430360 (-) | True | LOC110526044 |
| TU583050 | other | downstream | 1613907 | 46359888 ~ 46360886 (-) | True | apba1a |
| TU581656 | other | downstream | 2698406 | 45274638 ~ 45276387 (-) | True | znrf3 |
| TU584332 | other | upstream | 287018 | 48263993 ~ 48264977 (-) | True | G515122 |
| TU584340 | other | upstream | 315871 | 48292846 ~ 48297527 (-) | False | LOC110512142 |
| TU584341 | other | upstream | 315871 | 48292846 ~ 48293454 (-) | False | LOC110512142 |
| TU584348 | other | upstream | 340673 | 48317648 ~ 48318407 (-) | True | LOC110512142 |
| TU584351 | other | upstream | 342772 | 48319747 ~ 48320588 (-) | True | G515139 |
