Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU585306 |
| length | 238 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G516006 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 49270614 ~ 49290474 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU585186 | lncRNA | upstream | 9982 | 49233579 ~ 49260632 (+) | False | LOC110526066 |
| TU585187 | lncRNA | upstream | 24161 | 49242210 ~ 49246453 (+) | True | LOC110526066 |
| TU585286 | lncRNA | upstream | 37619 | 49232511 ~ 49232995 (+) | True | G515986 |
| TU585285 | lncRNA | upstream | 40544 | 49229169 ~ 49230070 (+) | True | G515985 |
| TU585177 | lncRNA | upstream | 108154 | 49161794 ~ 49162460 (+) | True | G515897 |
| TU585360 | lncRNA | downstream | 42566 | 49333040 ~ 49333982 (+) | True | G516038 |
| TU585367 | lncRNA | downstream | 56845 | 49347319 ~ 49385000 (+) | False | LOC118964898 |
| TU585372 | lncRNA | downstream | 67287 | 49357761 ~ 49359016 (+) | True | G516047 |
| TU585375 | lncRNA | downstream | 76345 | 49366819 ~ 49411934 (+) | True | G516050 |
| TU585368 | lncRNA | downstream | 96223 | 49386697 ~ 49387212 (+) | True | LOC118964898 |
| XR_005052142.1 | mRNA | upstream | 24114 | 49242039 ~ 49246500 (+) | False | LOC110526066 |
| XM_036980343.1 | mRNA | upstream | 80807 | 49188175 ~ 49189807 (+) | True | LOC118964897 |
| XM_021604927.2 | mRNA | upstream | 83280 | 49183291 ~ 49187334 (+) | False | edf1 |
| XM_021604928.2 | mRNA | upstream | 83280 | 49183861 ~ 49187334 (+) | False | edf1 |
| NM_001124502.1 | mRNA | upstream | 83904 | 49184189 ~ 49186710 (+) | False | edf1 |
| XR_005052148.1 | mRNA | downstream | 12191 | 49302665 ~ 49303356 (+) | True | LOC118964903 |
| XM_036980345.1 | mRNA | downstream | 71556 | 49362030 ~ 49386751 (+) | False | LOC118964898 |
| XM_036980344.1 | mRNA | downstream | 71557 | 49362031 ~ 49365894 (+) | False | LOC118964898 |
| XM_036980364.1 | mRNA | downstream | 228118 | 49518592 ~ 49522715 (+) | True | LOC118936463 |
| XM_036981758.1 | mRNA | downstream | 262555 | 49553029 ~ 49566639 (+) | True | LOC118965033 |
| TU585185 | other | upstream | 24161 | 49233579 ~ 49246453 (+) | False | LOC110526066 |
| TU585255 | other | upstream | 83291 | 49183873 ~ 49187323 (+) | True | edf1 |
| TU585107 | other | upstream | 316323 | 48948617 ~ 48954291 (+) | False | LOC110526072 |
| TU584412 | other | upstream | 682726 | 48551619 ~ 48587888 (+) | False | G515189 |
| TU584269 | other | upstream | 1318360 | 47950006 ~ 47952254 (+) | True | G515069 |
| TU585313 | other | downstream | 14651 | 49305125 ~ 49307140 (+) | True | G516011 |
| TU585370 | other | downstream | 96040 | 49386514 ~ 49387212 (+) | False | LOC118964898 |
| TU585910 | other | downstream | 458714 | 49749188 ~ 49751749 (+) | True | barhl1a |
| TU586434 | other | downstream | 1429927 | 50720401 ~ 50735236 (+) | True | LOC118964907 |
| TU586543 | other | downstream | 1621354 | 50911828 ~ 50922097 (+) | True | LOC110526128 |
