Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU586088 |
| length | 474 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G516659 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 49936319 ~ 49936792 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU586056 | lncRNA | upstream | 7351 | 49928409 ~ 49928968 (+) | True | G516649 |
| TU586031 | lncRNA | upstream | 36648 | 49897436 ~ 49899671 (+) | True | G516628 |
| TU586030 | lncRNA | upstream | 40037 | 49895906 ~ 49896282 (+) | True | spaca9 |
| TU585889 | lncRNA | upstream | 174709 | 49713585 ~ 49761610 (+) | False | G516489 |
| TU585888 | lncRNA | upstream | 174709 | 49759638 ~ 49761610 (+) | True | G516489 |
| TU586090 | lncRNA | downstream | 2154 | 49938946 ~ 49939253 (+) | True | G516661 |
| TU586093 | lncRNA | downstream | 4628 | 49941420 ~ 49941621 (+) | True | G516664 |
| TU586103 | lncRNA | downstream | 22520 | 49959312 ~ 49960013 (+) | True | G516674 |
| TU586120 | lncRNA | downstream | 69489 | 50006281 ~ 50006631 (+) | True | G516691 |
| TU586121 | lncRNA | downstream | 73348 | 50010140 ~ 50010708 (+) | True | G516692 |
| XM_036981761.1 | mRNA | upstream | 38955 | 49895848 ~ 49897364 (+) | False | spaca9 |
| XM_021606691.2 | mRNA | upstream | 183059 | 49748788 ~ 49753260 (+) | False | barhl1a |
| XM_021606690.2 | mRNA | upstream | 189042 | 49674141 ~ 49747277 (+) | True | cfap77 |
| XM_036981758.1 | mRNA | upstream | 369680 | 49553029 ~ 49566639 (+) | True | LOC118965033 |
| XM_036980364.1 | mRNA | upstream | 413604 | 49518592 ~ 49522715 (+) | True | LOC118936463 |
| XM_036980378.1 | mRNA | downstream | 11846 | 49948638 ~ 50001016 (+) | False | grin1b |
| XM_036980379.1 | mRNA | downstream | 11846 | 49948638 ~ 50001016 (+) | False | grin1b |
| XM_036980380.1 | mRNA | downstream | 11846 | 49948638 ~ 50001016 (+) | True | grin1b |
| XM_021606704.2 | mRNA | downstream | 114412 | 50051204 ~ 50054481 (+) | False | kazald3 |
| XM_021606703.2 | mRNA | downstream | 114414 | 50051206 ~ 50054481 (+) | False | kazald3 |
| TU585910 | other | upstream | 184570 | 49749188 ~ 49751749 (+) | True | barhl1a |
| TU585370 | other | upstream | 549107 | 49386514 ~ 49387212 (+) | False | LOC118964898 |
| TU585313 | other | upstream | 629179 | 49305125 ~ 49307140 (+) | True | G516011 |
| TU585185 | other | upstream | 689866 | 49233579 ~ 49246453 (+) | False | LOC110526066 |
| TU585255 | other | upstream | 748996 | 49183873 ~ 49187323 (+) | True | edf1 |
| TU586434 | other | downstream | 783609 | 50720401 ~ 50735236 (+) | True | LOC118964907 |
| TU586543 | other | downstream | 975036 | 50911828 ~ 50922097 (+) | True | LOC110526128 |
| TU589106 | other | downstream | 2341701 | 52278493 ~ 52278998 (+) | True | LOC110493840 |
| TU589275 | other | downstream | 2715148 | 52651940 ~ 52655297 (+) | True | G519603 |
| TU591331 | other | downstream | 3989150 | 53925942 ~ 53955130 (+) | True | G521552 |
