Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU586449 |
| length | 268 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G517000 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 50519839 ~ 50536407 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU586408 | lncRNA | upstream | 13541 | 50473529 ~ 50506298 (+) | True | G516964 |
| TU586372 | lncRNA | upstream | 85842 | 50433732 ~ 50433997 (+) | True | G516933 |
| TU586357 | lncRNA | upstream | 134782 | 50384006 ~ 50385057 (+) | True | G516918 |
| TU586156 | lncRNA | upstream | 311375 | 50196228 ~ 50208464 (+) | True | LOC110526093 |
| TU586182 | lncRNA | upstream | 417779 | 50101832 ~ 50102060 (+) | True | G516751 |
| TU586439 | lncRNA | downstream | 153495 | 50689902 ~ 50699685 (+) | True | G516990 |
| TU586530 | lncRNA | downstream | 225923 | 50762330 ~ 50763117 (+) | True | G517068 |
| TU586531 | lncRNA | downstream | 227309 | 50763716 ~ 50764117 (+) | True | G517069 |
| TU586572 | lncRNA | downstream | 236117 | 50772524 ~ 50773077 (+) | True | G517101 |
| TU586573 | lncRNA | downstream | 236939 | 50773346 ~ 50773606 (+) | True | G517102 |
| XM_021606719.2 | mRNA | upstream | 5950 | 50443516 ~ 50513889 (+) | False | ogdha |
| XM_021606721.2 | mRNA | upstream | 5950 | 50443516 ~ 50513889 (+) | False | ogdha |
| XM_021606722.2 | mRNA | upstream | 5950 | 50443516 ~ 50513889 (+) | True | ogdha |
| XM_021606717.2 | mRNA | upstream | 101857 | 50340035 ~ 50417982 (+) | False | adam9 |
| XM_036980388.1 | mRNA | upstream | 101857 | 50340047 ~ 50417982 (+) | False | adam9 |
| XM_036980389.1 | mRNA | downstream | 5286 | 50541693 ~ 50630258 (+) | False | LOC110526111 |
| XM_021606739.2 | mRNA | downstream | 12102 | 50548509 ~ 50630258 (+) | False | LOC110526111 |
| XM_036980390.1 | mRNA | downstream | 38241 | 50574648 ~ 50630258 (+) | True | LOC110526111 |
| XR_005052155.1 | mRNA | downstream | 127599 | 50664006 ~ 50670797 (+) | True | LOC118964908 |
| XR_005052154.1 | mRNA | downstream | 174979 | 50711386 ~ 50719146 (+) | True | LOC110526117 |
| TU585910 | other | upstream | 768090 | 49749188 ~ 49751749 (+) | True | barhl1a |
| TU585370 | other | upstream | 1132627 | 49386514 ~ 49387212 (+) | False | LOC118964898 |
| TU585313 | other | upstream | 1212699 | 49305125 ~ 49307140 (+) | True | G516011 |
| TU585185 | other | upstream | 1273386 | 49233579 ~ 49246453 (+) | False | LOC110526066 |
| TU585255 | other | upstream | 1332516 | 49183873 ~ 49187323 (+) | True | edf1 |
| TU586434 | other | downstream | 183994 | 50720401 ~ 50735236 (+) | True | LOC118964907 |
| TU586543 | other | downstream | 375421 | 50911828 ~ 50922097 (+) | True | LOC110526128 |
| TU589106 | other | downstream | 1742086 | 52278493 ~ 52278998 (+) | True | LOC110493840 |
| TU589275 | other | downstream | 2115533 | 52651940 ~ 52655297 (+) | True | G519603 |
| TU591331 | other | downstream | 3389535 | 53925942 ~ 53955130 (+) | True | G521552 |
