Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU587589 |
| length | 237 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G518012 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 51133659 ~ 51133895 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU587572 | lncRNA | upstream | 23566 | 51109782 ~ 51110093 (+) | True | G517998 |
| TU587552 | lncRNA | upstream | 39477 | 51093943 ~ 51094182 (+) | True | G517978 |
| TU587535 | lncRNA | upstream | 51580 | 51081713 ~ 51082079 (+) | True | G517961 |
| TU586539 | lncRNA | upstream | 149464 | 50980226 ~ 50984195 (+) | False | G517073 |
| TU586540 | lncRNA | upstream | 151972 | 50980226 ~ 50981687 (+) | True | G517073 |
| TU587613 | lncRNA | downstream | 14262 | 51148157 ~ 51148377 (+) | True | G518036 |
| TU587716 | lncRNA | downstream | 96101 | 51229996 ~ 51230526 (+) | True | G518132 |
| TU587717 | lncRNA | downstream | 97630 | 51231525 ~ 51231822 (+) | True | G518133 |
| TU587768 | lncRNA | downstream | 160293 | 51294188 ~ 51294400 (+) | True | G518182 |
| TU587771 | lncRNA | downstream | 166500 | 51300395 ~ 51300690 (+) | True | G518185 |
| XM_021606773.2 | mRNA | upstream | 5515 | 51113986 ~ 51128144 (+) | False | znf608 |
| XM_021606774.2 | mRNA | upstream | 5515 | 51113988 ~ 51128144 (+) | False | znf608 |
| XM_036980405.1 | mRNA | upstream | 5515 | 51114713 ~ 51128144 (+) | False | znf608 |
| XM_036980404.1 | mRNA | upstream | 5515 | 51116884 ~ 51128144 (+) | True | znf608 |
| XM_021606766.2 | mRNA | upstream | 116531 | 50991573 ~ 51017128 (+) | True | LOC110526132 |
| XM_021606776.2 | mRNA | downstream | 25539 | 51159434 ~ 51225264 (+) | False | LOC110526137 |
| XM_036980406.1 | mRNA | downstream | 25541 | 51159436 ~ 51225264 (+) | True | LOC110526137 |
| XR_005052160.1 | mRNA | downstream | 578895 | 51712790 ~ 51718231 (+) | False | LOC118964909 |
| XR_005052161.1 | mRNA | downstream | 578895 | 51712790 ~ 51718231 (+) | True | LOC118964909 |
| XM_021606787.2 | mRNA | downstream | 749388 | 51883283 ~ 52006875 (+) | False | homer1b |
| TU586543 | other | upstream | 211562 | 50911828 ~ 50922097 (+) | True | LOC110526128 |
| TU586434 | other | upstream | 398423 | 50720401 ~ 50735236 (+) | True | LOC118964907 |
| TU585910 | other | upstream | 1381910 | 49749188 ~ 49751749 (+) | True | barhl1a |
| TU585370 | other | upstream | 1746447 | 49386514 ~ 49387212 (+) | False | LOC118964898 |
| TU585313 | other | upstream | 1826519 | 49305125 ~ 49307140 (+) | True | G516011 |
| TU589106 | other | downstream | 1144598 | 52278493 ~ 52278998 (+) | True | LOC110493840 |
| TU589275 | other | downstream | 1518045 | 52651940 ~ 52655297 (+) | True | G519603 |
| TU591331 | other | downstream | 2792047 | 53925942 ~ 53955130 (+) | True | G521552 |
| TU591700 | other | downstream | 3136030 | 54269925 ~ 54270259 (+) | True | G521914 |
| TU592296 | other | downstream | 3745804 | 54879699 ~ 54940873 (+) | False | LOC110526161 |
