Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU588487 |
| length | 323 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G518848 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 51873041 ~ 51873363 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU588428 | lncRNA | upstream | 26169 | 51846313 ~ 51846872 (+) | True | G518795 |
| TU588432 | lncRNA | upstream | 27117 | 51845646 ~ 51845924 (+) | True | G518799 |
| TU588430 | lncRNA | upstream | 27549 | 51845201 ~ 51845492 (+) | True | G518797 |
| TU588401 | lncRNA | upstream | 134668 | 51735760 ~ 51738373 (+) | True | G518773 |
| TU588057 | lncRNA | upstream | 184505 | 51688140 ~ 51688536 (+) | True | G518452 |
| TU588769 | lncRNA | downstream | 149995 | 52023358 ~ 52023625 (+) | True | G519109 |
| TU588770 | lncRNA | downstream | 150385 | 52023748 ~ 52024087 (+) | True | G519110 |
| TU588778 | lncRNA | downstream | 157798 | 52031161 ~ 52031392 (+) | True | G519118 |
| TU588975 | lncRNA | downstream | 277662 | 52151025 ~ 52151235 (+) | True | G519306 |
| TU589044 | lncRNA | downstream | 332416 | 52205779 ~ 52206004 (+) | True | G519374 |
| XR_005052160.1 | mRNA | upstream | 154810 | 51712790 ~ 51718231 (+) | False | LOC118964909 |
| XR_005052161.1 | mRNA | upstream | 154810 | 51712790 ~ 51718231 (+) | True | LOC118964909 |
| XM_021606776.2 | mRNA | upstream | 647777 | 51159434 ~ 51225264 (+) | False | LOC110526137 |
| XM_036980406.1 | mRNA | upstream | 647777 | 51159436 ~ 51225264 (+) | True | LOC110526137 |
| XM_036980404.1 | mRNA | upstream | 744897 | 51116884 ~ 51128144 (+) | True | znf608 |
| XM_021606787.2 | mRNA | downstream | 9920 | 51883283 ~ 52006875 (+) | False | homer1b |
| XM_021606786.2 | mRNA | downstream | 59409 | 51932772 ~ 52006875 (+) | True | homer1b |
| XM_021568351.2 | mRNA | downstream | 404331 | 52277694 ~ 52279409 (+) | False | LOC110493840 |
| XM_021606788.2 | mRNA | downstream | 511779 | 52385142 ~ 52390468 (+) | False | otpb |
| XM_021606790.2 | mRNA | downstream | 511779 | 52385142 ~ 52390468 (+) | True | otpb |
| TU586543 | other | upstream | 950944 | 50911828 ~ 50922097 (+) | True | LOC110526128 |
| TU586434 | other | upstream | 1137805 | 50720401 ~ 50735236 (+) | True | LOC118964907 |
| TU585910 | other | upstream | 2121292 | 49749188 ~ 49751749 (+) | True | barhl1a |
| TU585370 | other | upstream | 2485829 | 49386514 ~ 49387212 (+) | False | LOC118964898 |
| TU585313 | other | upstream | 2565901 | 49305125 ~ 49307140 (+) | True | G516011 |
| TU589106 | other | downstream | 405130 | 52278493 ~ 52278998 (+) | True | LOC110493840 |
| TU589275 | other | downstream | 778577 | 52651940 ~ 52655297 (+) | True | G519603 |
| TU591331 | other | downstream | 2052579 | 53925942 ~ 53955130 (+) | True | G521552 |
| TU591700 | other | downstream | 2396562 | 54269925 ~ 54270259 (+) | True | G521914 |
| TU592296 | other | downstream | 3006336 | 54879699 ~ 54940873 (+) | False | LOC110526161 |
