Item | Value |
---|---|
RNA id | TCONS_00033895 |
length | 859 |
lncRNA type | inter_gene |
GC content | 0.47 |
exon number | 6 |
gene id | XLOC_016700 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_007113.7 |
NCBI id | CM002886.2 |
chromosome length | 59640629 |
location | 39830685 ~ 40033058 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0000003 | reproduction | biological_process |
GO:0022414 | reproductive process | biological_process |
GO:0000075 | cell cycle checkpoint | biological_process |
GO:0000077 | DNA damage checkpoint | biological_process |
GO:0009059 | macromolecule biosynthetic process | biological_process |
GO:0006974 | cellular response to DNA damage stimulus | biological_process |
GO:0031570 | DNA integrity checkpoint | biological_process |
GO:0044260 | cellular macromolecule metabolic process | biological_process |
GO:1990511 | piRNA biosynthetic process | biological_process |
GO:0000209 | protein polyubiquitination | biological_process |
GO:0033554 | cellular response to stress | biological_process |
GO:0043170 | macromolecule metabolic process | biological_process |
GO:0006807 | nitrogen compound metabolic process | biological_process |
GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
GO:0034645 | cellular macromolecule biosynthetic process | biological_process |
GO:0006259 | DNA metabolic process | biological_process |
GO:0006281 | DNA repair | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0043227 | membrane-bounded organelle | cellular_component |
GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
GO:0003676 | nucleic acid binding | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00033894 | lncRNA | downstream | 3174 | 39826704 ~ 39827511 (-) | True | XLOC_016699 |
TCONS_00033893 | lncRNA | downstream | 78129 | 39734569 ~ 39752556 (-) | False | XLOC_016698 |
TCONS_00032775 | lncRNA | downstream | 92787 | 39734569 ~ 39737898 (-) | False | XLOC_016698 |
TCONS_00033386 | lncRNA | downstream | 218221 | 39610321 ~ 39612464 (-) | True | XLOC_016697 |
TCONS_00032767 | lncRNA | downstream | 744111 | 39082296 ~ 39086574 (-) | False | XLOC_016693 |
TCONS_00032785 | lncRNA | upstream | 161041 | 40194067 ~ 40196570 (-) | True | XLOC_016703 |
TCONS_00033387 | lncRNA | upstream | 165791 | 40198817 ~ 40199412 (-) | False | XLOC_016704 |
TCONS_00032786 | lncRNA | upstream | 165791 | 40198817 ~ 40199780 (-) | True | XLOC_016704 |
TCONS_00033901 | lncRNA | upstream | 172882 | 40205908 ~ 40211792 (-) | True | XLOC_016705 |
TCONS_00033902 | lncRNA | upstream | 500937 | 40533963 ~ 40534863 (-) | True | XLOC_016706 |
TCONS_00032774 | mRNA | downstream | 71626 | 39731284 ~ 39759059 (-) | False | XLOC_016698 |
TCONS_00032773 | mRNA | downstream | 154856 | 39584066 ~ 39675829 (-) | True | XLOC_016696 |
TCONS_00032770 | mRNA | downstream | 272042 | 39549376 ~ 39558643 (-) | False | XLOC_016695 |
TCONS_00032780 | mRNA | upstream | 34795 | 40067821 ~ 40136018 (-) | False | XLOC_016701 |
TCONS_00032781 | mRNA | upstream | 36613 | 40069639 ~ 40136024 (-) | False | XLOC_016701 |
TCONS_00032782 | mRNA | upstream | 36930 | 40069956 ~ 40135942 (-) | False | XLOC_016701 |
TCONS_00032783 | mRNA | upstream | 98666 | 40131692 ~ 40136018 (-) | True | XLOC_016701 |
TCONS_00032784 | mRNA | upstream | 148607 | 40181633 ~ 40191603 (-) | True | XLOC_016702 |
TCONS_00032776 | other | downstream | 78129 | 39735552 ~ 39752556 (-) | True | XLOC_016698 |
TCONS_00032769 | other | downstream | 459758 | 39370811 ~ 39370927 (-) | True | XLOC_016694 |
TCONS_00032764 | other | downstream | 762139 | 39062754 ~ 39068546 (-) | False | XLOC_016693 |
TCONS_00032743 | other | downstream | 1625892 | 38203941 ~ 38204793 (-) | False | XLOC_016682 |
TCONS_00032691 | other | downstream | 2421528 | 37405351 ~ 37409157 (-) | True | XLOC_016651 |
TCONS_00032779 | other | upstream | 34782 | 40067808 ~ 40069852 (-) | False | XLOC_016701 |
TCONS_00032787 | other | upstream | 511920 | 40544946 ~ 40545061 (-) | True | XLOC_016707 |
TCONS_00032788 | other | upstream | 562349 | 40595375 ~ 40595494 (-) | True | XLOC_016708 |
TCONS_00032799 | other | upstream | 1178952 | 41211978 ~ 41212094 (-) | True | XLOC_016715 |
TCONS_00032800 | other | upstream | 1388580 | 41421606 ~ 41421722 (-) | True | XLOC_016717 |