RNA id: TCONS_00032788


Basic Information

Item Value
RNA id TCONS_00032788
length 120
RNA type rRNA
GC content 0.51
exon number 1
gene id XLOC_016708
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 40595375 ~ 40595494 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gcttaCGGCCATTCCACCCTGAGCACGCCCAATCTTTTCAGATCTCGGAAGTTAAGCAGGGTTGGCTCATGGTTATTACTTGGATGAGAGAcagcctgggaataccaggtgcggTAAACt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000120809

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033902 lncRNA downstream 60512 40533963 ~ 40534863 (-) True XLOC_016706
TCONS_00033901 lncRNA downstream 383583 40205908 ~ 40211792 (-) True XLOC_016705
TCONS_00032786 lncRNA downstream 395595 40198817 ~ 40199780 (-) True XLOC_016704
TCONS_00033387 lncRNA downstream 395963 40198817 ~ 40199412 (-) False XLOC_016704
TCONS_00032785 lncRNA downstream 398805 40194067 ~ 40196570 (-) True XLOC_016703
TCONS_00033903 lncRNA upstream 27460 40622954 ~ 40643790 (-) False XLOC_016709
TCONS_00033904 lncRNA upstream 27460 40622954 ~ 40680407 (-) False XLOC_016709
TCONS_00032790 lncRNA upstream 27460 40622954 ~ 40712235 (-) False XLOC_016709
TCONS_00032789 lncRNA upstream 27460 40622954 ~ 40712241 (-) False XLOC_016709
TCONS_00033906 lncRNA upstream 27460 40622954 ~ 40712263 (-) False XLOC_016709
TCONS_00032784 mRNA downstream 403772 40181633 ~ 40191603 (-) True XLOC_016702
TCONS_00032781 mRNA downstream 459351 40069639 ~ 40136024 (-) False XLOC_016701
TCONS_00032780 mRNA downstream 459357 40067821 ~ 40136018 (-) False XLOC_016701
TCONS_00032793 mRNA upstream 235274 40830768 ~ 40889465 (-) False XLOC_016712
TCONS_00032792 mRNA upstream 235274 40830768 ~ 40889465 (-) False XLOC_016712
TCONS_00032794 mRNA upstream 235274 40830768 ~ 40890264 (-) False XLOC_016712
TCONS_00032795 mRNA upstream 237480 40832974 ~ 40890004 (-) True XLOC_016712
TCONS_00032796 mRNA upstream 306503 40901997 ~ 41123797 (-) False XLOC_016713
TCONS_00032787 other downstream 50314 40544946 ~ 40545061 (-) True XLOC_016707
TCONS_00032779 other downstream 525523 40067808 ~ 40069852 (-) False XLOC_016701
TCONS_00032777 other downstream 568753 39926961 ~ 40026622 (-) False XLOC_016700
TCONS_00032778 other downstream 568753 40008738 ~ 40026622 (-) True XLOC_016700
TCONS_00032776 other downstream 842819 39735552 ~ 39752556 (-) True XLOC_016698
TCONS_00032799 other upstream 616484 41211978 ~ 41212094 (-) True XLOC_016715
TCONS_00032800 other upstream 826112 41421606 ~ 41421722 (-) True XLOC_016717
TCONS_00032808 other upstream 1021713 41617207 ~ 41620112 (-) True XLOC_016721
TCONS_00032811 other upstream 1350481 41945975 ~ 41946896 (-) True XLOC_016725
TCONS_00032833 other upstream 1776515 42372009 ~ 42375109 (-) True XLOC_016738