RNA id: TU601714



Basic Information


Item Value
RNA id TU601714
length 211
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G531341
representative True

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 62052998 ~ 62053208 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gaatgatatgttacaaatccaatttgtacaatatgttacgaatttgttgtgcttaagatccTGGACTGCATCTTTAAGTGATGCTTCGGTTCATGATCAACAGACTGAAAACAGGAAACAATGCACAGATTTAATGTTAGAGACTGTTGCCTAGGCAAAATGTTGATGTCTTATATCAATATCTACTTCAATTGTCACGCTACACATAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU601713 lncRNA upstream 892 62051869 ~ 62052106 (+) True G531340
TU601712 lncRNA upstream 1194 62051570 ~ 62051804 (+) True G531339
TU601707 lncRNA upstream 8494 62044285 ~ 62044504 (+) True G531334
TU601706 lncRNA upstream 9565 62043147 ~ 62043433 (+) True G531333
TU601705 lncRNA upstream 10011 62042718 ~ 62042987 (+) True G531332
TU601718 lncRNA downstream 3356 62056564 ~ 62056797 (+) True G531345
TU601719 lncRNA downstream 3708 62056916 ~ 62057147 (+) True G531346
TU601791 lncRNA downstream 107313 62160521 ~ 62183351 (+) True G531410
TU601806 lncRNA downstream 268313 62321521 ~ 62321951 (+) True G531418
TU601902 lncRNA downstream 448579 62501787 ~ 62506601 (+) True G531510
XM_036980635.1 mRNA upstream 20442 62026088 ~ 62032556 (+) True LOC110526284
XM_021607105.2 mRNA upstream 73473 61971487 ~ 61979525 (+) False LOC110526282
XM_021607100.2 mRNA upstream 88583 61961386 ~ 61964415 (+) True LOC110526279
XM_021607098.2 mRNA upstream 94789 61915719 ~ 61958209 (+) False LOC110526278
XM_021607114.2 mRNA downstream 18053 62071261 ~ 62084069 (+) True LOC110526286
XR_005052183.1 mRNA downstream 231162 62284370 ~ 62299748 (+) True LOC110526289
XM_021607117.2 mRNA downstream 275145 62328353 ~ 62346632 (+) True LOC110526291
XM_021607118.2 mRNA downstream 293559 62346767 ~ 62349795 (+) True LOC110526293
XM_021607120.2 mRNA downstream 324664 62377872 ~ 62386332 (+) True LOC110526295
TU601664 other upstream 73471 61971736 ~ 61979527 (+) True LOC110526282
TU598912 other upstream 2280914 59771708 ~ 59772084 (+) True G528653
TU597653 other upstream 3273981 58778723 ~ 58779017 (+) True G527450
TU596824 other upstream 3681030 58318920 ~ 58371968 (+) True LOC110526933
TU596784 other upstream 3780162 58272079 ~ 58272836 (+) True G526628
TU601786 other downstream 96565 62149773 ~ 62152218 (+) True G531406
TU602760 other downstream 767212 62820420 ~ 62822616 (+) True G532259
TU602899 other downstream 959050 63012258 ~ 63014986 (+) False LOC110526311
TU602734 other downstream 979723 63032931 ~ 63198734 (+) False G532237
TU603025 other downstream 1255325 63308533 ~ 63343755 (+) True G532489

Expression Profile