RNA id: TCONS_00032791


Basic Information

Item Value
RNA id TCONS_00032791
length 431
lncRNA type lincRNA
GC content 0.51
exon number 3
gene id XLOC_016711
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 40786665 ~ 40804968 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCTGAGCAGTCGTTCAACCACAGACAAACCAACTGGGAGCTCCAGACAGCCCTGCTGCGAGGCGAGCTGGAAAGGAGAATTATCGCTGCTGTCTGTCTCCCCTTTACCTTCAGATCTGAGAATTAGAGAGTGAGAGGAAAAGAATGGGGCCATGTGAGATCACATTCAGCCGGTTAAATGACAGTCTTAATGTCTGCGTGAATGATTAGGTGACGAGAGCTGGCCGAGAGTCCAGACTCAGTGACTGATGCAGACGTCGGAAATTACCTCAAGATGAAGCAATTCCTCCACCTTCCCCCATCTCTCCTTCCCTTTCAAGGTTACAGTACTTCAGCTTCAGATCGAGCCATGATTGCAGCATGCAGCAAGGTGCAGGGATCATCCCAGAGGAGCCCACCAGGCCTTCTTACTTGGGTTCTCCATTGAATTAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000194493

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033389 lncRNA downstream 16861 40766601 ~ 40769804 (-) False XLOC_016710
TCONS_00033908 lncRNA downstream 16881 40767225 ~ 40769784 (-) True XLOC_016710
TCONS_00033906 lncRNA downstream 74402 40622954 ~ 40712263 (-) False XLOC_016709
TCONS_00033905 lncRNA downstream 74402 40622954 ~ 40712263 (-) False XLOC_016709
TCONS_00032789 lncRNA downstream 74424 40622954 ~ 40712241 (-) False XLOC_016709
TCONS_00033909 lncRNA upstream 228551 41033519 ~ 41123797 (-) False XLOC_016713
TCONS_00033390 lncRNA upstream 357135 41162103 ~ 41447837 (-) False XLOC_016714
TCONS_00032798 lncRNA upstream 357135 41162103 ~ 41447837 (-) False XLOC_016714
TCONS_00033391 lncRNA upstream 357290 41162258 ~ 41447837 (-) False XLOC_016714
TCONS_00033910 lncRNA upstream 357417 41162385 ~ 41272468 (-) False XLOC_016714
TCONS_00032784 mRNA downstream 595062 40181633 ~ 40191603 (-) True XLOC_016702
TCONS_00032781 mRNA downstream 650641 40069639 ~ 40136024 (-) False XLOC_016701
TCONS_00032780 mRNA downstream 650647 40067821 ~ 40136018 (-) False XLOC_016701
TCONS_00032793 mRNA upstream 25800 40830768 ~ 40889465 (-) False XLOC_016712
TCONS_00032792 mRNA upstream 25800 40830768 ~ 40889465 (-) False XLOC_016712
TCONS_00032794 mRNA upstream 25800 40830768 ~ 40890264 (-) False XLOC_016712
TCONS_00032795 mRNA upstream 28006 40832974 ~ 40890004 (-) True XLOC_016712
TCONS_00032796 mRNA upstream 97029 40901997 ~ 41123797 (-) False XLOC_016713
TCONS_00032788 other downstream 191171 40595375 ~ 40595494 (-) True XLOC_016708
TCONS_00032787 other downstream 241604 40544946 ~ 40545061 (-) True XLOC_016707
TCONS_00032779 other downstream 716813 40067808 ~ 40069852 (-) False XLOC_016701
TCONS_00032777 other downstream 760043 39926961 ~ 40026622 (-) False XLOC_016700
TCONS_00032799 other upstream 407010 41211978 ~ 41212094 (-) True XLOC_016715
TCONS_00032800 other upstream 616638 41421606 ~ 41421722 (-) True XLOC_016717
TCONS_00032808 other upstream 812239 41617207 ~ 41620112 (-) True XLOC_016721
TCONS_00032811 other upstream 1141007 41945975 ~ 41946896 (-) True XLOC_016725
TCONS_00032833 other upstream 1567041 42372009 ~ 42375109 (-) True XLOC_016738

Expression Profile

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