RNA id: TCONS_00032799


Basic Information

Item Value
RNA id TCONS_00032799
length 117
RNA type rRNA
GC content 0.50
exon number 1
gene id XLOC_016715
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 41211978 ~ 41212094 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTCAGTAAAAAAGCATGtatgcaactctcacatggtcgcccactgaagctaagcagggctgccccTGGTCAATAgctggatgggaaaccacatgggaaagctaggttgatgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000178107

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033909 lncRNA downstream 88181 41033519 ~ 41123797 (-) False XLOC_016713
TCONS_00032791 lncRNA downstream 407010 40786665 ~ 40804968 (-) True XLOC_016711
TCONS_00033389 lncRNA downstream 442174 40766601 ~ 40769804 (-) False XLOC_016710
TCONS_00033908 lncRNA downstream 442194 40767225 ~ 40769784 (-) True XLOC_016710
TCONS_00033906 lncRNA downstream 499715 40622954 ~ 40712263 (-) False XLOC_016709
TCONS_00033911 lncRNA upstream 21255 41233349 ~ 41235532 (-) True XLOC_016716
TCONS_00033392 lncRNA upstream 54742 41266836 ~ 41447837 (-) False XLOC_016714
TCONS_00033912 lncRNA upstream 229483 41441577 ~ 41447891 (-) True XLOC_016714
TCONS_00033393 lncRNA upstream 292383 41504477 ~ 41512326 (-) False XLOC_016718
TCONS_00033394 lncRNA upstream 539746 41751840 ~ 41772041 (-) False XLOC_016722
TCONS_00032797 mRNA downstream 87965 41123277 ~ 41124013 (-) True XLOC_016713
TCONS_00032796 mRNA downstream 88181 40901997 ~ 41123797 (-) False XLOC_016713
TCONS_00032794 mRNA downstream 321714 40830768 ~ 40890264 (-) False XLOC_016712
TCONS_00032795 mRNA downstream 321974 40832974 ~ 40890004 (-) True XLOC_016712
TCONS_00032793 mRNA downstream 322513 40830768 ~ 40889465 (-) False XLOC_016712
TCONS_00032801 mRNA upstream 292658 41504752 ~ 41518340 (-) True XLOC_016718
TCONS_00032802 mRNA upstream 334177 41546271 ~ 41562868 (-) True XLOC_016719
TCONS_00032803 mRNA upstream 350979 41563073 ~ 41571454 (-) True XLOC_016720
TCONS_00032804 mRNA upstream 365413 41577507 ~ 41620112 (-) False XLOC_016721
TCONS_00032805 mRNA upstream 368695 41580789 ~ 41620112 (-) False XLOC_016721
TCONS_00032788 other downstream 616484 40595375 ~ 40595494 (-) True XLOC_016708
TCONS_00032787 other downstream 666917 40544946 ~ 40545061 (-) True XLOC_016707
TCONS_00032779 other downstream 1142126 40067808 ~ 40069852 (-) False XLOC_016701
TCONS_00032777 other downstream 1185356 39926961 ~ 40026622 (-) False XLOC_016700
TCONS_00032778 other downstream 1185356 40008738 ~ 40026622 (-) True XLOC_016700
TCONS_00032800 other upstream 209512 41421606 ~ 41421722 (-) True XLOC_016717
TCONS_00032808 other upstream 405113 41617207 ~ 41620112 (-) True XLOC_016721
TCONS_00032811 other upstream 733881 41945975 ~ 41946896 (-) True XLOC_016725
TCONS_00032833 other upstream 1159915 42372009 ~ 42375109 (-) True XLOC_016738
TCONS_00032837 other upstream 1191967 42404061 ~ 42415788 (-) True XLOC_016740