RNA id: TU607356


Basic Information

Item Value
RNA id TU607356
length 334
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G536392
representative True

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 66572059 ~ 66572392 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GAATAACAATCATCTGGTGATCGCTGAGAACCCCGAAACAGAGTTGGGTTAAGATGGCAAAGTTACAACCTCTtagtctacatgacaaacaaTATGTGTGGAATGGGTCAAAGGGTGAGGTTTTGTATTTGAGAAAGGAGTATCCCCCAGCCAGATATCATTTGCTGTGAAAACTGTTCTAATTATGTAGAAACCAAAGTTTGGCCCCTAAGACTAGGTTATTCTTATCAGCTGTCCATACCAGAGCCATCTCCTCCCTGGTACCTCCGAGTACACAAACACCAGAATACCAGGCTCCGAGAGAGGACACGACCATCCTAAATCAGTTGCTAGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU607333 lncRNA upstream 79596 66488565 ~ 66492463 (+) True G536371
TU607306 lncRNA upstream 122795 66447005 ~ 66449264 (+) True G536348
TU607287 lncRNA upstream 134888 66414416 ~ 66437171 (+) True G536329
TU607142 lncRNA upstream 231537 66340113 ~ 66340522 (+) True G536220
TU607140 lncRNA upstream 237811 66332709 ~ 66334248 (+) True G536218
TU607357 lncRNA downstream 849 66573241 ~ 66573496 (+) True G536393
TU607358 lncRNA downstream 1164 66573556 ~ 66573851 (+) True G536394
TU607364 lncRNA downstream 10966 66583358 ~ 66587117 (+) True G536400
TU607373 lncRNA downstream 76165 66648557 ~ 66651510 (+) True G536409
TU607563 lncRNA downstream 356173 66928565 ~ 66932555 (+) True G536585
XM_036980742.1 mRNA upstream 6706 66506911 ~ 66565353 (+) False LOC110526388
XM_036980743.1 mRNA upstream 6706 66506911 ~ 66565353 (+) False LOC110526388
XM_036980744.1 mRNA upstream 6706 66506911 ~ 66565353 (+) False LOC110526388
XM_036980746.1 mRNA upstream 6706 66538687 ~ 66565353 (+) False LOC110526388
XM_036980748.1 mRNA upstream 6706 66538687 ~ 66565353 (+) False LOC110526388
XM_021607336.2 mRNA downstream 3098 66575490 ~ 66591573 (+) False LOC110526389
XM_036980750.1 mRNA downstream 3133 66575525 ~ 66591573 (+) True LOC110526389
XM_021607338.2 mRNA downstream 20189 66592581 ~ 66596719 (+) False LOC110526391
XM_036980752.1 mRNA downstream 20947 66593339 ~ 66596719 (+) True LOC110526391
XM_036980751.1 mRNA downstream 25386 66597778 ~ 66602137 (+) True LOC110526390
TU605959 other upstream 722618 65847623 ~ 65849441 (+) True G535150
TU605427 other upstream 1410729 65156509 ~ 65161330 (+) True LOC110526356
TU605418 other upstream 1454103 65113280 ~ 65117956 (+) True G534653
TU605171 other upstream 1724955 64790322 ~ 64847104 (+) True G534453
TU605157 other upstream 1795723 64769147 ~ 64776336 (+) False LOC110526344
TU607370 other downstream 30393 66602785 ~ 66604053 (+) True G536406
TU608020 other downstream 440828 67013220 ~ 67018653 (+) True G536995
TU608058 other downstream 531914 67104306 ~ 67104862 (+) False G537029
TU608055 other downstream 532019 67104411 ~ 67104862 (+) False G537029
TU608056 other downstream 532019 67104411 ~ 67104908 (+) True G537029

Expression Profile