Item | Value |
---|---|
RNA id | TCONS_00033913 |
length | 19240 |
lncRNA type | inter_gene |
GC content | 0.35 |
exon number | 1 |
gene id | XLOC_016722 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_007113.7 |
NCBI id | CM002886.2 |
chromosome length | 59640629 |
location | 41751840 ~ 41772041 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0018130 | heterocycle biosynthetic process | biological_process |
GO:0009058 | biosynthetic process | biological_process |
GO:0009059 | macromolecule biosynthetic process | biological_process |
GO:1901576 | organic substance biosynthetic process | biological_process |
GO:1901362 | organic cyclic compound biosynthetic process | biological_process |
GO:0044249 | cellular biosynthetic process | biological_process |
GO:0044260 | cellular macromolecule metabolic process | biological_process |
GO:0044271 | cellular nitrogen compound biosynthetic process | biological_process |
GO:0019438 | aromatic compound biosynthetic process | biological_process |
GO:0034645 | cellular macromolecule biosynthetic process | biological_process |
GO:0034654 | nucleobase-containing compound biosynthetic process | biological_process |
GO:0044424 | obsolete intracellular part | cellular_component |
GO:0005622 | intracellular anatomical structure | cellular_component |
GO:0005634 | nucleus | cellular_component |
GO:0003677 | DNA binding | molecular_function |
GO:0003682 | chromatin binding | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00033393 | lncRNA | downstream | 239625 | 41504477 ~ 41512326 (-) | False | XLOC_016718 |
TCONS_00033912 | lncRNA | downstream | 304060 | 41441577 ~ 41447891 (-) | True | XLOC_016714 |
TCONS_00033392 | lncRNA | downstream | 304114 | 41266836 ~ 41447837 (-) | False | XLOC_016714 |
TCONS_00033910 | lncRNA | downstream | 479483 | 41162385 ~ 41272468 (-) | False | XLOC_016714 |
TCONS_00032813 | lncRNA | upstream | 201347 | 41972537 ~ 41983756 (-) | True | XLOC_016727 |
TCONS_00032815 | lncRNA | upstream | 256267 | 42027457 ~ 42030255 (-) | False | XLOC_016728 |
TCONS_00033914 | lncRNA | upstream | 256267 | 42027457 ~ 42030986 (-) | False | XLOC_016728 |
TCONS_00032816 | lncRNA | upstream | 258361 | 42029551 ~ 42030986 (-) | False | XLOC_016728 |
TCONS_00033915 | lncRNA | upstream | 824734 | 42595924 ~ 42596530 (-) | False | XLOC_016743 |
TCONS_00032807 | mRNA | downstream | 28464 | 41583176 ~ 41723487 (-) | False | XLOC_016721 |
TCONS_00032806 | mRNA | downstream | 28786 | 41582845 ~ 41723165 (-) | False | XLOC_016721 |
TCONS_00032804 | mRNA | downstream | 131839 | 41577507 ~ 41620112 (-) | False | XLOC_016721 |
TCONS_00032805 | mRNA | downstream | 131839 | 41580789 ~ 41620112 (-) | False | XLOC_016721 |
TCONS_00032803 | mRNA | downstream | 180497 | 41563073 ~ 41571454 (-) | True | XLOC_016720 |
TCONS_00032809 | mRNA | upstream | 63835 | 41835025 ~ 41861040 (-) | True | XLOC_016723 |
TCONS_00032810 | mRNA | upstream | 165413 | 41936603 ~ 41942666 (-) | True | XLOC_016724 |
TCONS_00032812 | mRNA | upstream | 177996 | 41949186 ~ 41964402 (-) | True | XLOC_016726 |
TCONS_00032814 | mRNA | upstream | 249725 | 42020915 ~ 42035250 (-) | False | XLOC_016728 |
TCONS_00032817 | mRNA | upstream | 259348 | 42030538 ~ 42035307 (-) | True | XLOC_016728 |
TCONS_00032808 | other | downstream | 131839 | 41617207 ~ 41620112 (-) | True | XLOC_016721 |
TCONS_00032800 | other | downstream | 330229 | 41421606 ~ 41421722 (-) | True | XLOC_016717 |
TCONS_00032799 | other | downstream | 539857 | 41211978 ~ 41212094 (-) | True | XLOC_016715 |
TCONS_00032788 | other | downstream | 1156457 | 40595375 ~ 40595494 (-) | True | XLOC_016708 |
TCONS_00032787 | other | downstream | 1206890 | 40544946 ~ 40545061 (-) | True | XLOC_016707 |
TCONS_00032811 | other | upstream | 174785 | 41945975 ~ 41946896 (-) | True | XLOC_016725 |
TCONS_00032833 | other | upstream | 600819 | 42372009 ~ 42375109 (-) | True | XLOC_016738 |
TCONS_00032837 | other | upstream | 632871 | 42404061 ~ 42415788 (-) | True | XLOC_016740 |
TCONS_00032848 | other | upstream | 901660 | 42672850 ~ 42704933 (-) | True | XLOC_016744 |
TCONS_00032856 | other | upstream | 1191038 | 42962228 ~ 42962344 (-) | True | XLOC_016753 |