RNA id: TCONS_00032811


Basic Information

Item Value
RNA id TCONS_00032811
length 471
RNA type processed_transcript
GC content 0.30
exon number 3
gene id XLOC_016725
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 41945975 ~ 41946896 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CTGTTGAATTCACCTCAGATCAGTGTTGCTGTAATTCCTGATCTATGGAAAGAAGAATTGAATAAGcgagcaacgccacaactACAGGGCCTGTTCTTTCTCTACTCATAATTTAAGTAActggattatccgttgaatttgtttcttcctctgactgctttctccataccaacaactacgactggtcttcagctgcgctccccggtctgctgtattctccagtccagaGTTTCACTGCCCAgtgtttgaattttaatttatatatttatttatatatttatttacattttaatgatttcttgtttacttttcttgtttgtttaccctttagtttaatttatatatatatacttttatatatttatatatatatatctaaactttattttatactgtttgcttataattagatactgtatgtgtactgtatgtattaaatgttgtgaaatatataataaaaagtttgattat

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000133015

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033394 lncRNA downstream 173934 41751840 ~ 41772041 (-) False XLOC_016722
TCONS_00033913 lncRNA downstream 174785 41751951 ~ 41771190 (-) True XLOC_016722
TCONS_00033393 lncRNA downstream 433649 41504477 ~ 41512326 (-) False XLOC_016718
TCONS_00033912 lncRNA downstream 498084 41441577 ~ 41447891 (-) True XLOC_016714
TCONS_00033392 lncRNA downstream 498138 41266836 ~ 41447837 (-) False XLOC_016714
TCONS_00032813 lncRNA upstream 25641 41972537 ~ 41983756 (-) True XLOC_016727
TCONS_00032815 lncRNA upstream 80561 42027457 ~ 42030255 (-) False XLOC_016728
TCONS_00033914 lncRNA upstream 80561 42027457 ~ 42030986 (-) False XLOC_016728
TCONS_00032816 lncRNA upstream 82655 42029551 ~ 42030986 (-) False XLOC_016728
TCONS_00033915 lncRNA upstream 649028 42595924 ~ 42596530 (-) False XLOC_016743
TCONS_00032810 mRNA downstream 3309 41936603 ~ 41942666 (-) True XLOC_016724
TCONS_00032809 mRNA downstream 84935 41835025 ~ 41861040 (-) True XLOC_016723
TCONS_00032807 mRNA downstream 222488 41583176 ~ 41723487 (-) False XLOC_016721
TCONS_00032806 mRNA downstream 222810 41582845 ~ 41723165 (-) False XLOC_016721
TCONS_00032804 mRNA downstream 325863 41577507 ~ 41620112 (-) False XLOC_016721
TCONS_00032812 mRNA upstream 2290 41949186 ~ 41964402 (-) True XLOC_016726
TCONS_00032814 mRNA upstream 74019 42020915 ~ 42035250 (-) False XLOC_016728
TCONS_00032817 mRNA upstream 83642 42030538 ~ 42035307 (-) True XLOC_016728
TCONS_00032818 mRNA upstream 92140 42039036 ~ 42065069 (-) True XLOC_016729
TCONS_00032819 mRNA upstream 121262 42068158 ~ 42071558 (-) True XLOC_016730
TCONS_00032808 other downstream 325863 41617207 ~ 41620112 (-) True XLOC_016721
TCONS_00032800 other downstream 524253 41421606 ~ 41421722 (-) True XLOC_016717
TCONS_00032799 other downstream 733881 41211978 ~ 41212094 (-) True XLOC_016715
TCONS_00032788 other downstream 1350481 40595375 ~ 40595494 (-) True XLOC_016708
TCONS_00032787 other downstream 1400914 40544946 ~ 40545061 (-) True XLOC_016707
TCONS_00032833 other upstream 425113 42372009 ~ 42375109 (-) True XLOC_016738
TCONS_00032837 other upstream 457165 42404061 ~ 42415788 (-) True XLOC_016740
TCONS_00032848 other upstream 725954 42672850 ~ 42704933 (-) True XLOC_016744
TCONS_00032856 other upstream 1015332 42962228 ~ 42962344 (-) True XLOC_016753
TCONS_00032894 other upstream 2245903 44192799 ~ 44199697 (-) False XLOC_016779

Expression Profile

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