RNA id: TU608055



Basic Information


Item Value
RNA id TU608055
length 452
RNA type TUCP
GC content 0.62
exon number 1
gene id G537029
representative False

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 67104306 ~ 67104908 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GGCTGGCCTCGTGGCGGGAGTTGATGGTATGCATGCGTAGCTTCTCCAGGCTGTTAGTGTAGTAGTCGCAGGCGTTGCACTTCAGGTGCACCGGGTTGCCGATGGCCACGCACTTCAAGCGCCACTCGTTGCCCTTACCCCCCTCCTTGATGTGGGCCACCAGCTGGTACTTCTGCACATGCTTGTCGGTCTTGCAGTGCAGCTGGAAGTTGGCCTTCAGCTGTGTGGTGTAACGGCACAGCTTGCACTGGTGCGAGTCGCCCACCACGGCGCGCCACTCCTCCTCGGGCAGGCTGCGCTCAGCACCCATGTGCATGCCCAGCACGTCCAGGTTGTCGGTGGTAAAGCGGTTGCACACGGCACACTGGAACAGCTTGAGGGAGGGGTCACTGGTCTGCGACAAGCTCTCCCCCAGGGTCATCAGCTCCTCAGACACCAACTGACCACCAACG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU608054 lncRNA upstream 2022 67102182 ~ 67102389 (+) True G537028
TU608053 lncRNA upstream 2546 67101662 ~ 67101865 (+) True G537027
TU608052 lncRNA upstream 8807 67095394 ~ 67095604 (+) True G537026
TU608049 lncRNA upstream 12257 67091911 ~ 67092154 (+) True G537023
TU608048 lncRNA upstream 17796 67086377 ~ 67086615 (+) True G537022
TU608060 lncRNA downstream 3950 67108812 ~ 67109391 (+) True G537031
TU608069 lncRNA downstream 12110 67116972 ~ 67117192 (+) True G537035
TU608070 lncRNA downstream 15525 67120387 ~ 67120795 (+) True G537036
TU608071 lncRNA downstream 16030 67120892 ~ 67121170 (+) True G537037
TU608072 lncRNA downstream 22335 67127197 ~ 67127432 (+) True G537038
XM_036980753.1 mRNA upstream 328079 66756330 ~ 66776332 (+) False LOC110526948
XM_036980755.1 mRNA upstream 328079 66756330 ~ 66776332 (+) False LOC110526948
XM_036980754.1 mRNA upstream 328079 66756364 ~ 66776332 (+) True LOC110526948
XM_021607342.2 mRNA upstream 350971 66748816 ~ 66753440 (+) True LOC110526393
LOC110526947 mRNA upstream 383970 66719808 ~ 66720441 (+) True LOC110526947
XM_021607349.2 mRNA downstream 423280 67528142 ~ 67544856 (+) False LOC110526401
XM_021607350.2 mRNA downstream 423282 67528144 ~ 67544856 (+) True LOC110526401
XM_021608125.2 mRNA downstream 538952 67643814 ~ 67644573 (+) True LOC110526949
XM_021607367.2 mRNA downstream 631948 67736810 ~ 67753397 (+) False LOC110526406
XM_021607369.2 mRNA downstream 631948 67736810 ~ 67753397 (+) False LOC110526406
TU608020 other upstream 85758 67013220 ~ 67018653 (+) True G536995
TU607370 other upstream 500358 66602785 ~ 66604053 (+) True G536406
TU605959 other upstream 1254970 65847623 ~ 65849441 (+) True G535150
TU605427 other upstream 1943081 65156509 ~ 65161330 (+) True LOC110526356
TU605418 other upstream 1986455 65113280 ~ 65117956 (+) True G534653
TU608066 other downstream 4814 67109676 ~ 67110628 (+) True G537032
TU608672 other downstream 649694 67754556 ~ 67756618 (+) True G537606
TU608686 other downstream 661894 67766756 ~ 67767613 (+) True G537617
TU609823 other downstream 1574515 68679377 ~ 68681652 (+) True LOC110526436
TU609862 other downstream 1599536 68704398 ~ 68704696 (+) True G538561

Expression Profile