Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00032815 |
| length | 902 |
| lncRNA type | retained_intron |
| GC content | 0.44 |
| exon number | 4 |
| gene id | XLOC_016728 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 42020915 ~ 42035307 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0003924 | GTPase activity | molecular_function |
| GO:0005525 | GTP binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040718-32 | Predicted to enable GTP binding activity and GTPase activity. Orthologous to human GBP1 (guanylate binding protein 1); GBP4 (guanylate binding protein 4); and GBP6 (guanylate binding protein family member 6). |
| ensembl_id | ENSDART00000131716 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00032813 | lncRNA | downstream | 43701 | 41972537 ~ 41983756 (-) | True | XLOC_016727 |
| TCONS_00033394 | lncRNA | downstream | 255416 | 41751840 ~ 41772041 (-) | False | XLOC_016722 |
| TCONS_00033913 | lncRNA | downstream | 256267 | 41751951 ~ 41771190 (-) | True | XLOC_016722 |
| TCONS_00033393 | lncRNA | downstream | 515131 | 41504477 ~ 41512326 (-) | False | XLOC_016718 |
| TCONS_00033912 | lncRNA | downstream | 579566 | 41441577 ~ 41447891 (-) | True | XLOC_016714 |
| TCONS_00033915 | lncRNA | upstream | 565669 | 42595924 ~ 42596530 (-) | False | XLOC_016743 |
| TCONS_00033916 | lncRNA | upstream | 565973 | 42596228 ~ 42597593 (-) | True | XLOC_016743 |
| TCONS_00032846 | lncRNA | upstream | 579126 | 42609381 ~ 42612407 (-) | False | XLOC_016744 |
| TCONS_00033917 | lncRNA | upstream | 598304 | 42628559 ~ 42628918 (-) | False | XLOC_016744 |
| TCONS_00033918 | lncRNA | upstream | 635647 | 42665902 ~ 42748662 (-) | True | XLOC_016745 |
| TCONS_00032812 | mRNA | downstream | 63055 | 41949186 ~ 41964402 (-) | True | XLOC_016726 |
| TCONS_00032810 | mRNA | downstream | 84791 | 41936603 ~ 41942666 (-) | True | XLOC_016724 |
| TCONS_00032809 | mRNA | downstream | 166417 | 41835025 ~ 41861040 (-) | True | XLOC_016723 |
| TCONS_00032807 | mRNA | downstream | 303970 | 41583176 ~ 41723487 (-) | False | XLOC_016721 |
| TCONS_00032806 | mRNA | downstream | 304292 | 41582845 ~ 41723165 (-) | False | XLOC_016721 |
| TCONS_00032817 | mRNA | upstream | 283 | 42030538 ~ 42035307 (-) | True | XLOC_016728 |
| TCONS_00032818 | mRNA | upstream | 8781 | 42039036 ~ 42065069 (-) | True | XLOC_016729 |
| TCONS_00032819 | mRNA | upstream | 37903 | 42068158 ~ 42071558 (-) | True | XLOC_016730 |
| TCONS_00032820 | mRNA | upstream | 58201 | 42088456 ~ 42091926 (-) | True | XLOC_016731 |
| TCONS_00032821 | mRNA | upstream | 65232 | 42095487 ~ 42109575 (-) | True | XLOC_016732 |
| TCONS_00032811 | other | downstream | 80561 | 41945975 ~ 41946896 (-) | True | XLOC_016725 |
| TCONS_00032808 | other | downstream | 407345 | 41617207 ~ 41620112 (-) | True | XLOC_016721 |
| TCONS_00032800 | other | downstream | 605735 | 41421606 ~ 41421722 (-) | True | XLOC_016717 |
| TCONS_00032799 | other | downstream | 815363 | 41211978 ~ 41212094 (-) | True | XLOC_016715 |
| TCONS_00032788 | other | downstream | 1431963 | 40595375 ~ 40595494 (-) | True | XLOC_016708 |
| TCONS_00032833 | other | upstream | 341754 | 42372009 ~ 42375109 (-) | True | XLOC_016738 |
| TCONS_00032837 | other | upstream | 373806 | 42404061 ~ 42415788 (-) | True | XLOC_016740 |
| TCONS_00032848 | other | upstream | 642595 | 42672850 ~ 42704933 (-) | True | XLOC_016744 |
| TCONS_00032856 | other | upstream | 931973 | 42962228 ~ 42962344 (-) | True | XLOC_016753 |
| TCONS_00032894 | other | upstream | 2162544 | 44192799 ~ 44199697 (-) | False | XLOC_016779 |
