RNA id: TU608686



Basic Information


Item Value
RNA id TU608686
length 804
RNA type TUCP
GC content 0.61
exon number 2
gene id G537617
representative True

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 67766756 ~ 67767613 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TGTCTGGGGTGCTGCGCTGCCCAGGCGAAGCCCTCTCGCCCAGCCTTCGGCTCTTCAGGCTCCTGTCCTGTGCGTGCTCCAGTGCTACAGAGGCGGATGCTGCCTGCAGCAGCCTTGCATTCCTGGCATTGTAGTCCTGGAGCAtctcctgctcCCCGCTGTAGGGGTCCCTGGGGGCAGGCGCAGCCCTGGTGCCCTGAGGGTGGTAAAAGACAGGCACTCCCCGAGGACTGAGCTCTGCGGCGGGCAGCGGGCCCAGGTGCTGGGCAGCCTGTTCCGAGGTCAGCATCAGCGGGACCCCTCCGGAAGACCCCACTTTGGCAAAGGCATGGGCAGATACATGGGTCTGGGTAGGAGGGGAGACCAACCCCTCCTGGATGACTGACTGGTAGGGGACCAGGTGGGGCTGGGAGAGGGCAACTGAGGGGGAGATCAGGGTGCTGGGAACAAAGCCAGGGGGGACTGCATAAGGGACTGCACCATATGGAGAGACAAACtggaaagaggagtgggggaTCTGGGCATAGCCTAGAGGGGGATAGGAGATACCTGGATGATGCTGTAGGAGAGATGAGGGGACAGTGTAAGCTGGAGAGATATGGCTTAACACTGGGTGTAGATTGGTCTGGGAGtaggagacagaagggagagcCACCCTATAGAGCATGCTGTACTGGTCAACAGGCAGCCCTTGGAGGCCCTCAGCACTCTCTACTCCATAGTGTAGACCAGGCTGAGCATGCAGCCACTCCTCTGCTGTGCCACCTCCCTGAGTGTCACTACCGACCCCTGAGCTCTGAGTGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU608681 lncRNA upstream 4720 67757232 ~ 67762036 (+) False G537615
TU608683 lncRNA upstream 6431 67757125 ~ 67760325 (+) False G537615
TU608682 lncRNA upstream 6431 67757232 ~ 67760325 (+) True G537615
TU608678 lncRNA upstream 16878 67749622 ~ 67749878 (+) True G537612
TU608650 lncRNA upstream 58036 67703515 ~ 67708720 (+) True G537589
TU608703 lncRNA downstream 26326 67793939 ~ 67803569 (+) True G537630
TU608709 lncRNA downstream 28462 67796075 ~ 67806829 (+) False G537632
TU608710 lncRNA downstream 28462 67796075 ~ 67824783 (+) False G537632
TU608707 lncRNA downstream 37302 67804915 ~ 67824783 (+) False G537632
TU608708 lncRNA downstream 37302 67804915 ~ 67824783 (+) True G537632
XM_021607362.2 mRNA upstream 13359 67739424 ~ 67753397 (+) False LOC110526406
XM_036980794.1 mRNA downstream 81661 67849274 ~ 67897779 (+) False LOC110526410
XM_036980795.1 mRNA downstream 81661 67849274 ~ 67897779 (+) True LOC110526410
XM_021607377.2 mRNA downstream 192201 67959814 ~ 67973591 (+) True LOC110526412
XM_021607380.2 mRNA downstream 239415 68007028 ~ 68116406 (+) False adam10a
XM_036980803.1 mRNA downstream 239425 68007038 ~ 68116406 (+) False adam10a
TU608672 other upstream 10138 67754556 ~ 67756618 (+) True G537606
TU608066 other upstream 656128 67109676 ~ 67110628 (+) True G537032
TU608056 other upstream 661848 67104411 ~ 67104908 (+) True G537029
TU608058 other upstream 661894 67104306 ~ 67104862 (+) False G537029
TU608055 other upstream 661894 67104411 ~ 67104862 (+) False G537029
TU609823 other downstream 911764 68679377 ~ 68681652 (+) True LOC110526436
TU609862 other downstream 936785 68704398 ~ 68704696 (+) True G538561
TU609930 other downstream 1043506 68811119 ~ 68811890 (+) True G538607
TU610240 other downstream 1138432 68906045 ~ 68906847 (+) True G538859
TU610258 other downstream 1228470 68996083 ~ 69002828 (+) True G538877

Expression Profile