RNA id: TU608721



Basic Information


Item Value
RNA id TU608721
length 239
lncRNA type inter_gene
GC content 0.58
exon number 1
gene id G537639
representative True

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 67832504 ~ 67832742 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtctggggaatgggcgggccagtccatagcatcaatgccttcctcttgcaggaactgctgacacactccagccacatgaggtctagcattgtcttgcattaggaggaacccagggccaaccgcaccagcatatggtctcacaaggggtctgaggatctcatctcggtaccgaatggcagtcaggctacctctggcgagcacatggagggctgtgcggccccccaaagaaatgccacccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU608720 lncRNA upstream 633 67831514 ~ 67831871 (+) True G537638
TU608713 lncRNA upstream 1595 67813043 ~ 67830909 (+) True G537635
TU608710 lncRNA upstream 7721 67796075 ~ 67824783 (+) False G537632
TU608707 lncRNA upstream 7721 67804915 ~ 67824783 (+) False G537632
TU608708 lncRNA upstream 7721 67804915 ~ 67824783 (+) True G537632
TU608722 lncRNA downstream 647 67833389 ~ 67833641 (+) True G537640
TU608724 lncRNA downstream 2559 67835301 ~ 67835571 (+) True G537642
TU608736 lncRNA downstream 67058 67899800 ~ 67901041 (+) True G537654
TU608781 lncRNA downstream 107813 67940555 ~ 67941516 (+) True G537699
TU608808 lncRNA downstream 138583 67971325 ~ 67972779 (+) False G537720
XM_021607362.2 mRNA upstream 79107 67739424 ~ 67753397 (+) False LOC110526406
XM_036980794.1 mRNA downstream 16532 67849274 ~ 67897779 (+) False LOC110526410
XM_036980795.1 mRNA downstream 16532 67849274 ~ 67897779 (+) True LOC110526410
XM_021607377.2 mRNA downstream 127072 67959814 ~ 67973591 (+) True LOC110526412
XM_021607380.2 mRNA downstream 174286 68007028 ~ 68116406 (+) False adam10a
XM_036980803.1 mRNA downstream 174296 68007038 ~ 68116406 (+) False adam10a
TU608686 other upstream 64891 67766756 ~ 67767613 (+) True G537617
TU608672 other upstream 75886 67754556 ~ 67756618 (+) True G537606
TU608066 other upstream 721876 67109676 ~ 67110628 (+) True G537032
TU608056 other upstream 727596 67104411 ~ 67104908 (+) True G537029
TU608055 other upstream 727642 67104411 ~ 67104862 (+) False G537029
TU609823 other downstream 846635 68679377 ~ 68681652 (+) True LOC110526436
TU609862 other downstream 871656 68704398 ~ 68704696 (+) True G538561
TU609930 other downstream 978377 68811119 ~ 68811890 (+) True G538607
TU610240 other downstream 1073303 68906045 ~ 68906847 (+) True G538859
TU610258 other downstream 1163341 68996083 ~ 69002828 (+) True G538877

Expression Profile