Item | Value |
---|---|
RNA id | TCONS_00032847 |
length | 1126 |
RNA type | mRNA |
GC content | 0.52 |
exon number | 5 |
gene id | XLOC_016744 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_007113.7 |
NCBI id | CM002886.2 |
chromosome length | 59640629 |
location | 42605252 ~ 42705284 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0007165 | signal transduction | biological_process |
GO:0016459 | myosin complex | cellular_component |
GO:0005856 | cytoskeleton | cellular_component |
GO:0005524 | ATP binding | molecular_function |
GO:0000166 | nucleotide binding | molecular_function |
GO:0003774 | motor activity | molecular_function |
GO:0003779 | actin binding | molecular_function |
id | description |
---|---|
ko04666 | Fc gamma R-mediated phagocytosis |
ko05130 | Pathogenic Escherichia coli infection |
ko04812 | Cytoskeleton proteins |
id | description |
---|---|
ZDB-GENE-070912-277 | Predicted to enable ATP binding activity; actin binding activity; and cytoskeletal motor activity. Predicted to act upstream of or within signal transduction. Predicted to be located in cytoplasm and cytoskeleton. Predicted to be part of myosin complex. Is expressed in midbrain hindbrain boundary; otic vesicle; and rhombomere. Orthologous to human MYO10 (myosin X). |
ensembl_id | ENSDART00000187160 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00033917 | lncRNA | downstream | 25822 | 42628559 ~ 42628918 (-) | False | XLOC_016744 |
TCONS_00032846 | lncRNA | downstream | 42333 | 42609381 ~ 42612407 (-) | False | XLOC_016744 |
TCONS_00033916 | lncRNA | downstream | 57147 | 42596228 ~ 42597593 (-) | True | XLOC_016743 |
TCONS_00033915 | lncRNA | downstream | 58210 | 42595924 ~ 42596530 (-) | False | XLOC_016743 |
TCONS_00033914 | lncRNA | downstream | 623754 | 42027457 ~ 42030986 (-) | False | XLOC_016728 |
TCONS_00033919 | lncRNA | upstream | 3385 | 42708669 ~ 42710429 (-) | True | XLOC_016747 |
TCONS_00033920 | lncRNA | upstream | 8515 | 42713799 ~ 42717726 (-) | True | XLOC_016748 |
TCONS_00033921 | lncRNA | upstream | 13753 | 42719037 ~ 42771871 (-) | False | XLOC_016749 |
TCONS_00033922 | lncRNA | upstream | 51607 | 42756891 ~ 42771978 (-) | False | XLOC_016749 |
TCONS_00033396 | lncRNA | upstream | 54269 | 42759553 ~ 42764475 (-) | True | XLOC_016749 |
TCONS_00032845 | mRNA | downstream | 26712 | 42605392 ~ 42628028 (-) | False | XLOC_016744 |
TCONS_00032843 | mRNA | downstream | 96191 | 42496523 ~ 42558549 (-) | True | XLOC_016742 |
TCONS_00032842 | mRNA | downstream | 102074 | 42496498 ~ 42552666 (-) | False | XLOC_016742 |
TCONS_00032840 | mRNA | downstream | 162539 | 42422390 ~ 42492201 (-) | False | XLOC_016741 |
TCONS_00032849 | mRNA | upstream | 70940 | 42776224 ~ 42864472 (-) | False | XLOC_016750 |
TCONS_00032850 | mRNA | upstream | 70940 | 42776224 ~ 42871286 (-) | False | XLOC_016750 |
TCONS_00032851 | mRNA | upstream | 109658 | 42814942 ~ 42827336 (-) | False | XLOC_016750 |
TCONS_00032852 | mRNA | upstream | 109943 | 42815227 ~ 42843797 (-) | True | XLOC_016750 |
TCONS_00032853 | mRNA | upstream | 237268 | 42942552 ~ 42960353 (-) | False | XLOC_016752 |
TCONS_00032837 | other | downstream | 238952 | 42404061 ~ 42415788 (-) | True | XLOC_016740 |
TCONS_00032833 | other | downstream | 279631 | 42372009 ~ 42375109 (-) | True | XLOC_016738 |
TCONS_00032811 | other | downstream | 707844 | 41945975 ~ 41946896 (-) | True | XLOC_016725 |
TCONS_00032808 | other | downstream | 1034628 | 41617207 ~ 41620112 (-) | True | XLOC_016721 |
TCONS_00032800 | other | downstream | 1233018 | 41421606 ~ 41421722 (-) | True | XLOC_016717 |
TCONS_00032856 | other | upstream | 256944 | 42962228 ~ 42962344 (-) | True | XLOC_016753 |
TCONS_00032894 | other | upstream | 1487515 | 44192799 ~ 44199697 (-) | False | XLOC_016779 |
TCONS_00032911 | other | upstream | 1817572 | 44522856 ~ 44524381 (-) | True | XLOC_016786 |
TCONS_00032916 | other | upstream | 2052765 | 44758049 ~ 44760347 (-) | True | XLOC_016790 |
TCONS_00032917 | other | upstream | 2057798 | 44763082 ~ 44763375 (-) | True | XLOC_016791 |