RNA id: TCONS_00032864


Basic Information

Item Value
RNA id TCONS_00032864
length 1199
RNA type mRNA
GC content 0.47
exon number 4
gene id XLOC_016759
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 43128362 ~ 43130930 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATATGACTGGCTGATTCGTTTTTCACAAACAGGAAGTGATTCTTCTCAGAAAAATTGAAACTTAAGCTGTTGTCGAAGTGTTGAGTATTCTCTTCTGTCTGTGAGTTTGTGCTGTAAAATGGCAGAATGTAGTATTTCAGTGGCTCAGGATCAGTTTAGCTGTTCAATCTGTCTGGATCTACTGAAGGATCCAGTGGCCATTCCCTGTGGTCACAGTTACTGCATGAGCTGTATTTCAGACTGCTGGGATCAGGATGAGCAGAGGGGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCACTCCAAGACCTGCTTTAGGGAAAAACACCATGCTGGCTGAAGTGGTGGGGAAACTCAAGAAGACCAAACTACAAGCTGCTCGTCCTGCTCAGTGTTACTCTGAGTCTGCAGATGTGGAGTGTGATGTTTGTACTGGAGACAAAAACAAAGCCGTCAAATCCTGTCTGATGTGTCTGAACTCTTACTGCCAAAATCATCTTGAGCAACACGCGAGTTTCTTCAGAAGTAAAAAACACAATCTCATGGACGCCACTGGACGACTGCAGGAGATGATCTGCCCTCAACATGACAAACTACTGGAGGTTTTCTGTCGTACTGATCAGTGCTGTATATGTTATCTGTGTACAATGGATGGACACAAAAACCACAACACTGTATCAGCTGCAGCAGAAAGGACTGACAAACATAGGCAGTTGGAGGAAACCCAGAGTAAACTCCATCAAAGAATCCAGAGGAAACAGGTGGAGTTTGAGGAGCTGAGAGCAGCTGTAGAGTCTCACAAGTGCTCTGCACAGGCAGCAGTGGAAGACACTGAGAGGATCTTTACTGACCTCATCCGCTCCATTGAGAGAAGCCGCTCTGAGGTGACGCAGCTGATCAGAGATCAGGAAAAGGCTGCAGTAAGTGAAGCTGAAGGACGACTGGAGCGACTGGAGCAGGAGATTGATGATCTGAGGAGGAGAGACGCTGAGCTGGAGCAGCTTTCACACACAGACCATCACATCCATTTCCTCCAGAGTTTCCAGTCTCTCTCTACTCCTCCTGGATCTACAGACTCATCCAGCATCACTGTCAGCTCTTCTCTCTCTTTTGATGATGTTGGTAAATCTGTGTCTCGACTGAGAGAGAAACTGGAGCATTTCTGCAGAGAGGAGATAGAAAAGATAACTTGGAGAA

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-395 Predicted to enable zinc ion binding activity.

Ensembl:

ensembl_id ENSDART00000056162

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033923 lncRNA downstream 142350 42982889 ~ 42986970 (-) True XLOC_016755
TCONS_00033400 lncRNA downstream 146310 42981204 ~ 42983010 (-) False XLOC_016755
TCONS_00033399 lncRNA downstream 146310 42981204 ~ 42983010 (-) False XLOC_016755
TCONS_00033398 lncRNA downstream 150708 42962862 ~ 42978612 (-) True XLOC_016754
TCONS_00033397 lncRNA downstream 193082 42935881 ~ 42936238 (-) True XLOC_016751
TCONS_00033924 lncRNA upstream 247172 43378102 ~ 43379093 (-) True XLOC_016763
TCONS_00032871 lncRNA upstream 378572 43509502 ~ 43517018 (-) True XLOC_016764
TCONS_00033925 lncRNA upstream 436215 43567145 ~ 43571656 (-) False XLOC_016766
TCONS_00033926 lncRNA upstream 437144 43568074 ~ 43571670 (-) False XLOC_016766
TCONS_00033927 lncRNA upstream 438756 43569686 ~ 43571760 (-) True XLOC_016766
TCONS_00032862 mRNA downstream 4573 43098604 ~ 43124747 (-) True XLOC_016758
TCONS_00032861 mRNA downstream 5371 43098237 ~ 43123949 (-) False XLOC_016758
TCONS_00032860 mRNA downstream 5371 43098237 ~ 43123949 (-) False XLOC_016758
TCONS_00032859 mRNA downstream 45565 43017295 ~ 43083755 (-) True XLOC_016757
TCONS_00032858 mRNA downstream 45571 43014379 ~ 43083749 (-) False XLOC_016757
TCONS_00032865 mRNA upstream 217 43131147 ~ 43135700 (-) True XLOC_016760
TCONS_00032866 mRNA upstream 14008 43144938 ~ 43151358 (-) False XLOC_016761
TCONS_00032867 mRNA upstream 18939 43149869 ~ 43151358 (-) True XLOC_016761
TCONS_00032868 mRNA upstream 28241 43159171 ~ 43168292 (-) False XLOC_016762
TCONS_00032869 mRNA upstream 28821 43159751 ~ 43191465 (-) False XLOC_016762
TCONS_00032856 other downstream 166976 42962228 ~ 42962344 (-) True XLOC_016753
TCONS_00032848 other downstream 424387 42672850 ~ 42704933 (-) True XLOC_016744
TCONS_00032837 other downstream 713532 42404061 ~ 42415788 (-) True XLOC_016740
TCONS_00032833 other downstream 754211 42372009 ~ 42375109 (-) True XLOC_016738
TCONS_00032811 other downstream 1182424 41945975 ~ 41946896 (-) True XLOC_016725
TCONS_00032894 other upstream 1061869 44192799 ~ 44199697 (-) False XLOC_016779
TCONS_00032911 other upstream 1391926 44522856 ~ 44524381 (-) True XLOC_016786
TCONS_00032916 other upstream 1627119 44758049 ~ 44760347 (-) True XLOC_016790
TCONS_00032917 other upstream 1632152 44763082 ~ 44763375 (-) True XLOC_016791
TCONS_00032918 other upstream 1643345 44774275 ~ 44774595 (-) True XLOC_016792

Expression Profile

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