RNA id: TCONS_00032872


Basic Information

Item Value
RNA id TCONS_00032872
length 832
RNA type mRNA
GC content 0.46
exon number 4
gene id XLOC_016765
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 43537846 ~ 43545342 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGATGATGGatgtttttgttgtgtgttttgtgtgtgtgtgtgcagatggtAATGAATGCACCAAGGCTTCGGCCCAGTCCTGTGGCGAATGCATTCAGGCCGGAGAAAAGTGTGGCTGGTGTACAGATGAGGGCTTTCTGAAACAGGGAGAGCAGAAATCCACACGCTGTGATGAAATCGAGGCTCTGGAGAAAAAGGGCTGTTCCAAGGCCAGCATTGAAAATCCTCGTGGAAAGATAACCATCGTCAAGAACCAGCCTGTGACAAACCGCACAAAAAATGGAGCAAAACTGAAGCCAGATCAGATCACCCAGATTCAGCCTCAGCAGCTCAGCCTGAACCTCAGATCGGGCGAAGCGCAGAAGTTTACTCTGAAATTCAAGAGGGCTGAGGATTACCCCATAGACCTCTACTACCTGATGGACCTCAGCTACTCTATGAAAGATGATTTGGAAAACGTCAAAAACCTGGGAACCGACCTGATGAAAGAAATGCAAAAGATCACCTCTGACTTCAGGATTGGCTTCGGTTCTTTTGTGGAGAAAACTGTGATGCCATACATCAGCACGACTCCGGCCAAACTGCTGAACCCCTGCACGTCAGACCAGAACTGCACCAGTCCGTTCAGCTATAAGAATGTGCTGAGTTTGACCGATGACGGCTCTCAGTTTAATAGCTTGGTGAGCAGGCAGCAGATCTCAGGAAACCTGGACTCACCCGAGGGAGGCTTCGATGCCATCATGCAAGTGGCTGTCTGTGGGGTTCGTcttttagattttattaaaaattgttgtctaattttttaatatatatatatatatatatatatat

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000179796

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00032871 lncRNA downstream 20828 43509502 ~ 43517018 (-) True XLOC_016764
TCONS_00033924 lncRNA downstream 158753 43378102 ~ 43379093 (-) True XLOC_016763
TCONS_00033923 lncRNA downstream 550876 42982889 ~ 42986970 (-) True XLOC_016755
TCONS_00033400 lncRNA downstream 554836 42981204 ~ 42983010 (-) False XLOC_016755
TCONS_00033399 lncRNA downstream 554836 42981204 ~ 42983010 (-) False XLOC_016755
TCONS_00033925 lncRNA upstream 21803 43567145 ~ 43571656 (-) False XLOC_016766
TCONS_00033926 lncRNA upstream 22732 43568074 ~ 43571670 (-) False XLOC_016766
TCONS_00033927 lncRNA upstream 24344 43569686 ~ 43571760 (-) True XLOC_016766
TCONS_00033401 lncRNA upstream 84411 43629753 ~ 43630083 (-) True XLOC_016770
TCONS_00033928 lncRNA upstream 162125 43707467 ~ 43707953 (-) False XLOC_016773
TCONS_00032870 mRNA downstream 341251 43159817 ~ 43196595 (-) True XLOC_016762
TCONS_00032869 mRNA downstream 346381 43159751 ~ 43191465 (-) False XLOC_016762
TCONS_00032868 mRNA downstream 369554 43159171 ~ 43168292 (-) False XLOC_016762
TCONS_00032866 mRNA downstream 386488 43144938 ~ 43151358 (-) False XLOC_016761
TCONS_00032867 mRNA downstream 386488 43149869 ~ 43151358 (-) True XLOC_016761
TCONS_00032873 mRNA upstream 31952 43577294 ~ 43583896 (-) True XLOC_016767
TCONS_00032874 mRNA upstream 40229 43585571 ~ 43605556 (-) True XLOC_016768
TCONS_00032875 mRNA upstream 74213 43619555 ~ 43635777 (-) True XLOC_016769
TCONS_00032876 mRNA upstream 93641 43638983 ~ 43653328 (-) False XLOC_016771
TCONS_00032877 mRNA upstream 93755 43639097 ~ 43653015 (-) True XLOC_016771
TCONS_00032856 other downstream 575502 42962228 ~ 42962344 (-) True XLOC_016753
TCONS_00032848 other downstream 832913 42672850 ~ 42704933 (-) True XLOC_016744
TCONS_00032837 other downstream 1122058 42404061 ~ 42415788 (-) True XLOC_016740
TCONS_00032833 other downstream 1162737 42372009 ~ 42375109 (-) True XLOC_016738
TCONS_00032811 other downstream 1590950 41945975 ~ 41946896 (-) True XLOC_016725
TCONS_00032894 other upstream 647457 44192799 ~ 44199697 (-) False XLOC_016779
TCONS_00032911 other upstream 977514 44522856 ~ 44524381 (-) True XLOC_016786
TCONS_00032916 other upstream 1212707 44758049 ~ 44760347 (-) True XLOC_016790
TCONS_00032917 other upstream 1217740 44763082 ~ 44763375 (-) True XLOC_016791
TCONS_00032918 other upstream 1228933 44774275 ~ 44774595 (-) True XLOC_016792

Expression Profile

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