RNA id: TCONS_00032922


Basic Information

Item Value
RNA id TCONS_00032922
length 117
RNA type rRNA
GC content 0.50
exon number 1
gene id XLOC_016798
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 45073794 ~ 45073910 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AGCCACAGCCAAATCTCCCTGCaacccaagaccggttactcactgaagctaaacaTGGCTGAGCTTTGtgagtacctggatggaagaccacatgggaaaactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000177131

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033931 lncRNA downstream 6608 45052537 ~ 45067186 (-) True XLOC_016797
TCONS_00033930 lncRNA downstream 28274 45044482 ~ 45045520 (-) True XLOC_016796
TCONS_00033929 lncRNA downstream 510601 44562014 ~ 44563193 (-) True XLOC_016787
TCONS_00032909 lncRNA downstream 667669 44401080 ~ 44406125 (-) False XLOC_016785
TCONS_00032910 lncRNA downstream 667672 44403755 ~ 44406122 (-) True XLOC_016785
TCONS_00033932 lncRNA upstream 21107 45095017 ~ 45098398 (-) True XLOC_016799
TCONS_00032923 lncRNA upstream 25264 45099174 ~ 45099504 (-) True XLOC_016800
TCONS_00033402 lncRNA upstream 151212 45225122 ~ 45226951 (-) False XLOC_016805
TCONS_00033403 lncRNA upstream 151212 45225122 ~ 45227245 (-) True XLOC_016805
TCONS_00033933 lncRNA upstream 339691 45413601 ~ 45415299 (-) True XLOC_016808
TCONS_00032921 mRNA downstream 46040 44984509 ~ 45027754 (-) True XLOC_016795
TCONS_00032920 mRNA downstream 102243 44960876 ~ 44971551 (-) True XLOC_016794
TCONS_00032919 mRNA downstream 127700 44943396 ~ 44946094 (-) True XLOC_016793
TCONS_00032914 mRNA downstream 296115 44749201 ~ 44777679 (-) False XLOC_016790
TCONS_00032915 mRNA downstream 296202 44749903 ~ 44777592 (-) False XLOC_016790
TCONS_00032924 mRNA upstream 42909 45116819 ~ 45135618 (-) True XLOC_016801
TCONS_00032925 mRNA upstream 65560 45139470 ~ 45154550 (-) False XLOC_016802
TCONS_00032926 mRNA upstream 66236 45140146 ~ 45153531 (-) False XLOC_016802
TCONS_00032927 mRNA upstream 79531 45153441 ~ 45154622 (-) True XLOC_016802
TCONS_00032928 mRNA upstream 98928 45172838 ~ 45191319 (-) True XLOC_016803
TCONS_00032918 other downstream 299199 44774275 ~ 44774595 (-) True XLOC_016792
TCONS_00032917 other downstream 310419 44763082 ~ 44763375 (-) True XLOC_016791
TCONS_00032916 other downstream 313447 44758049 ~ 44760347 (-) True XLOC_016790
TCONS_00032911 other downstream 549413 44522856 ~ 44524381 (-) True XLOC_016786
TCONS_00032894 other downstream 874097 44192799 ~ 44199697 (-) False XLOC_016779
TCONS_00032929 other upstream 128313 45202223 ~ 45202331 (-) True XLOC_016804
TCONS_00032936 other upstream 433189 45507099 ~ 45510654 (-) True XLOC_016810
TCONS_00032939 other upstream 582234 45656144 ~ 45658746 (-) False XLOC_016813
TCONS_00032940 other upstream 582326 45656236 ~ 45663914 (-) False XLOC_016813
TCONS_00032941 other upstream 585465 45659375 ~ 45663905 (-) False XLOC_016813