RNA id: TU632315



Basic Information


Item Value
RNA id TU632315
length 219
lncRNA type inter_gene
GC content 0.37
exon number 2
gene id G557870
representative True

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 89418656 ~ 89418953 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ATTATAGTCTGTTTAAATAGAGAAATCTCCCTTCTTCACTGTGAGGTCATACAGTATCTAATAGCCTTGTAGAGTTCATATTCCAGTCTGTTTTAAATAGAGAGAAATGTCCCTTCTTCACTGTGAGGTCATACAGTATCTAACAGCCTTGTAGAGTTCCTATTCCAGTCTGTTTTAAATAGAGATAAAGCTCCCTTCACTGTGAGGTCATATCTTACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU632303 lncRNA downstream 30984 89387430 ~ 89387672 (-) True G557858
TU632291 lncRNA downstream 40790 89377578 ~ 89377866 (-) True G557848
TU632287 lncRNA downstream 44475 89372947 ~ 89374181 (-) True G557844
TU632276 lncRNA downstream 50166 89366904 ~ 89368490 (-) True G557835
TU632246 lncRNA downstream 64162 89354292 ~ 89354494 (-) True G557824
TU632337 lncRNA upstream 18142 89437095 ~ 89437298 (-) True G557890
TU632352 lncRNA upstream 37690 89456643 ~ 89456976 (-) True G557905
TU632382 lncRNA upstream 60713 89479666 ~ 89479999 (-) True G557933
TU632397 lncRNA upstream 91172 89510125 ~ 89510325 (-) True G557946
TU632402 lncRNA upstream 100615 89519568 ~ 89519774 (-) True G557951
trnag-ucc mRNA downstream 23682 89394903 ~ 89394974 (-) True trnag-ucc
XM_021591141.2 mRNA downstream 72225 89317125 ~ 89346431 (-) True LOC110509922
XM_036981435.1 mRNA downstream 151164 89227541 ~ 89267492 (-) True LOC110526791
XM_036981436.1 mRNA downstream 151172 89227541 ~ 89267484 (-) False LOC110526791
XM_036981434.1 mRNA downstream 307061 88974571 ~ 89111595 (-) True LOC110526789
XM_036981437.1 mRNA upstream 137426 89556379 ~ 89561287 (-) False LOC118964962
XM_036981438.1 mRNA upstream 137426 89556379 ~ 89561289 (-) True LOC118964962
XM_036981443.1 mRNA upstream 538962 89957915 ~ 89965389 (-) False LOC110526793
XM_036981448.1 mRNA upstream 838291 90257244 ~ 90267943 (-) True LOC110506981
XM_036981796.1 mRNA upstream 882433 90301386 ~ 90303985 (-) True LOC118965054
TU632049 other downstream 258771 89159224 ~ 89159885 (-) True G557663
TU630905 other downstream 1633304 87773247 ~ 87785352 (-) True LOC110526751
TU630611 other downstream 1867266 87546589 ~ 87551390 (-) True LOC110513865
TU630566 other downstream 1920564 87483766 ~ 87498092 (-) True LOC110506946
TU630563 other downstream 1954801 87457977 ~ 87463855 (-) False LOC110506946
TU632545 other upstream 202395 89621348 ~ 89621755 (-) True G558051
TU632626 other upstream 301522 89720475 ~ 89721154 (-) False G558124
TU632786 other upstream 447015 89865968 ~ 89866927 (-) False G558246
TU632790 other upstream 447015 89865968 ~ 89868057 (-) False G558246
TU632795 other upstream 447015 89865968 ~ 89867915 (-) False G558246

Expression Profile